RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TTC25Q96NG3 672 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 PSMG3-AS1Q96PY0 264 aa16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 INSM2Q96T92 566 aaPredicted RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 NHEJ1Q9H9Q4 299 aaPredicted RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
HDGFL3-203ENST00000563404 GLYATL1P3A0A0U1RQE8 302 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 OR5K3A6NET4 321 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 MTHFD1P11586 935 aaKnown RBP16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 IL10RAQ13651 578 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 PPP2R5EQ16537 467 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 METRNLQ641Q3 311 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 CPZQ66K79 652 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 KAZNQ674X7 775 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 GLT6D1Q7Z4J2 308 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 D2HGDHQ8N465 521 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 SLC38A9Q8NBW4 561 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 PPM1MQ96MI6 270 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 FCRL5Q96RD9 977 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 WWP1Q9H0M0 922 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 FGF21Q9NSA1 209 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 ABHD10Q9NUJ1 306 aa16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 IMP3Q9NV31 184 aaKnown RBP16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 DNMT3AQ9Y6K1 912 aaPredicted RBP16.41■□□□□ 0.22
HDGFL3-203ENST00000563404 TNRC6AQ8NDV7 1962 aaKnown RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 TLCD2A6NGC4 264 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 PTPN4P29074 926 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 SLC1A1P43005 524 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 UQCRFS1P47985 274 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 ACY1Q03154 408 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 CHAF1BQ13112 559 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 PLCL1Q15111 1095 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 TCEAL1Q15170 157 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 GPR19Q15760 415 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 UGT8Q16880 541 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 FNBP1LQ5T0N5 605 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 ZDHHC20Q5W0Z9 365 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 CYB5D1Q6P9G0 228 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 FBXO38Q6PIJ6 1188 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 SPOCD1Q6ZMY3 1216 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 DET1Q7L5Y6 550 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 ZC3H18Q86VM9 953 aaKnown RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 IPMKQ8NFU5 416 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 HAUS1Q96CS2 278 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 ZNF501Q96CX3 271 aaPredicted RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 GORASP1Q9BQQ3 440 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 ZCCHC2Q9C0B9 1178 aaKnown RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 GOLPH3Q9H4A6 298 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 SMOXQ9NWM0 555 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 HRASLS2Q9NWW9 162 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 HACD3Q9P035 362 aa16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 KLHL8Q9P2G9 620 aaPredicted RBP16.4■□□□□ 0.22
HDGFL3-203ENST00000563404 BLACEA4D250 179 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 SGTAO43765 313 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 KPNA2P52292 529 aaKnown RBP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 HSD11B2P80365 405 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 GPS2Q13227 327 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 ITGA9Q13797 1035 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 TFDP2Q14188 446 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 PRAMEF17Q5VTA0 474 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 LCN10Q6JVE6 187 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 KLHL35Q6PF15 583 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 ZNF517Q6ZMY9 492 aaPredicted RBP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 BZW1Q7L1Q6 419 aaKnown RBP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 PID1Q7Z2X4 250 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 BPHLQ86WA6 291 aaPredicted RBP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 KMT5CQ86Y97 462 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 LILRA3Q8N6C8 439 aaPredicted RBP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 CCDC42Q96M95 316 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 CD180Q99467 661 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 GPR87Q9BY21 358 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 ZNHIT6Q9NWK9 470 aaKnown RBP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 ARL5AQ9Y689 179 aa16.39■□□□□ 0.21
HDGFL3-203ENST00000563404 UBA6A0AVT1 1052 aaPredicted RBP16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 OR6C74A6NCV1 312 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 MGAT4DA6NG13 374 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 DDX3YO15523 660 aaKnown RBP16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 SPOPO43791 374 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 MFAP3LO75121 409 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 AGTP01019 485 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 HLA-DPA1P20036 260 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 ARCN1P48444 511 aaKnown RBP16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 MARCKSL1P49006 195 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 TUBB4BP68371 445 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 MPP3Q13368 585 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 XRCC4Q13426 336 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 OLIG2Q13516 323 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 TUBB2AQ13885 445 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 TRIM14Q14142 442 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 ATCAYQ86WG3 371 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 OR2L2Q8NH16 312 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 ZNF398Q8TD17 642 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 C12orf66Q96MD2 445 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 QKIQ96PU8 341 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 TUBB2BQ9BVA1 445 aa16.38■□□□□ 0.21
HDGFL3-203ENST00000563404 C10orf88Q9H8K7 445 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms