RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 FEZF1A0PJY2 475 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 SMTNL1A8MU46 457 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 HEPACAM2A8MVW5 462 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 TOMM70O94826 608 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 SNRNP70P08621 437 aaKnown RBP5.36□□□□□ -1.55
LINC00557-201ENST00000563184 VPREB1P12018 145 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 CDH13P55290 713 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 SNRPEP62304 92 aaKnown RBP5.36□□□□□ -1.55
LINC00557-201ENST00000563184 FAM171BQ6P995 826 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 PLXDC2Q6UX71 529 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 POMGNT2Q8NAT1 580 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 KCNH5Q8NCM2 988 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 OR10S1Q8NGN2 331 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 PPP4R1Q8TF05 950 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 DUX5Q96PT3 197 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 PKP4Q99569 1192 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 OLFM1Q99784 485 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 CCDC106Q9BWC9 280 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 TAB2Q9NYJ8 693 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF711Q9Y462 761 aa5.36□□□□□ -1.55
LINC00557-201ENST00000563184 ASPDHA6ND91 283 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 ANKRD66B4E2M5 251 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 H0YIN7 160 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF132P52740 706 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 EEF1A1P68104 462 aaKnown RBP5.35□□□□□ -1.55
LINC00557-201ENST00000563184 UBXN2AP68543 259 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 AIMP1Q12904 312 aaKnown RBP5.35□□□□□ -1.55
LINC00557-201ENST00000563184 SNTB1Q13884 538 aaKnown RBP5.35□□□□□ -1.55
LINC00557-201ENST00000563184 ASIC2Q16515 512 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 KYNUQ16719 465 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 EEF1A1P5Q5VTE0 462 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 FIGLAQ6QHK4 219 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 DSG4Q86SJ6 1040 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF595Q8IYB9 648 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 MUC20Q8N307 709 aaPredicted RBP5.35□□□□□ -1.55
LINC00557-201ENST00000563184 CFAP61Q8NHU2 1237 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 ZFAND2BQ8WV99 257 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 SECTM1Q8WVN6 248 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 LINGO1Q96FE5 620 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 PGAP3Q96FM1 320 aaPredicted RBP5.35□□□□□ -1.55
LINC00557-201ENST00000563184 PRMT6Q96LA8 375 aaPredicted RBP5.35□□□□□ -1.55
LINC00557-201ENST00000563184 NEK1Q96PY6 1258 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 OR6C1Q96RD1 312 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 GPR88Q9GZN0 384 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 GOLPH3LQ9H4A5 285 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 C5AR2Q9P296 337 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 RHCGQ9UBD6 479 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 YIPF1Q9Y548 306 aa5.35□□□□□ -1.55
LINC00557-201ENST00000563184 TEX13DA0A0J9YY54 714 aaPredicted RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 ACOT8O14734 319 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 BUD23O43709 281 aaKnown RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 SSX4O60224 188 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 PRAMEF11O60813 436 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 BMP10O95393 424 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 DNASE1P24855 282 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 GABRA5P31644 462 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 AHRP35869 848 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 RPL24P83731 157 aaKnown RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 ALCAMQ13740 583 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 SNAPC1Q16533 368 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 CBWD6Q4V339 395 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 CBWD3Q5JTY5 395 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 C9orf152Q5JTZ5 239 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 SPSB3Q6PJ21 355 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 PLEKHM3Q6ZWE6 761 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 NAGSQ8N159 534 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 AFAP1Q8N556 730 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 KBTBD3Q8NAB2 608 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 ZBTB8BQ8NAP8 495 aaPredicted RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 TDRD5Q8NAT2 981 aaKnown RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 OXNAD1Q96HP4 312 aaPredicted RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 ZNF830Q96NB3 372 aaPredicted RBP5.34□□□□□ -1.55
LINC00557-201ENST00000563184 SLX1AQ9BQ83 275 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 EVA1AQ9H8M9 152 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 OLAHQ9NV23 265 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 HAO2Q9NYQ3 351 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 NPAP1Q9NZP6 1156 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 WDR35Q9P2L0 1181 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 POU2F3Q9UKI9 436 aa5.34□□□□□ -1.55
LINC00557-201ENST00000563184 A0A0G2JNG1 304 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 PRSS51A0A1B0GVH4 220 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 TCRBV21S2A2A0A5A6 115 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 DVL1O14640 695 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 SPRY1O43609 319 aaPredicted RBP5.33□□□□□ -1.56
LINC00557-201ENST00000563184 GJA1P17302 382 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 MMP15P51511 669 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 CCR3P51677 355 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 PNRC1Q12796 327 aaPredicted RBP5.33□□□□□ -1.56
LINC00557-201ENST00000563184 KIR2DS5Q14953 304 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 GCNT6Q5T4J0 391 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 IRAK1BP1Q5VVH5 260 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 CAPRIN2Q6IMN6 1127 aaKnown RBP5.33□□□□□ -1.56
LINC00557-201ENST00000563184 SLC9B2Q86UD5 537 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 TC2NQ8N9U0 490 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 OR2AJ1Q8NGZ0 328 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 SMPDL3BQ92485 455 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 SEMA4DQ92854 862 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 FAM81BQ96LP2 452 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 POLR3CQ9BUI4 534 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms