RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 LIMK2P53671 638 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 C16orf72Q14CZ0 275 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 PCID2Q5JVF3 399 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 SNAP47Q5SQN1 464 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 METRNLQ641Q3 311 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 TMEM71Q6P5X7 295 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 IGF2-ASQ6U949 168 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 ZNF574Q6ZN55 896 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-206ENST00000562610 TMEM26Q6ZUK4 368 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 ZNF534Q76KX8 674 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 CLDN19Q8N6F1 224 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 GPR150Q8NGU9 434 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 HM13Q8TCT9 377 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 TMEM159Q96B96 161 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 PRR11Q96HE9 360 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-206ENST00000562610 LINC00615Q96LM1 132 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-206ENST00000562610 SLC46A1Q96NT5 459 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 TTC1Q99614 292 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 CHRAC1Q9NRG0 131 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 SYBUQ9NX95 663 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 KLHL3Q9UH77 587 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 RIMKLBQ9ULI2 386 aa15.81■□□□□ 0.12
COMMD4-206ENST00000562610 PRAMEF33A0A0G2JMD5 474 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 CTAGE9A4FU28 777 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 RRP8O43159 456 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 KRT37O76014 449 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 POLBP06746 335 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ITGA2BP08514 1039 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 THRAP10827 490 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 TYRP1P17643 537 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 NSG1P42857 185 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 NPY2RP49146 381 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 MAPK10P53779 464 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ERVPABLB-1P60509 514 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 SARNPP82979 210 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 CFHR1Q03591 330 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ACVR1Q04771 509 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 TRA2AQ13595 282 aaKnown RBP eCLIP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 GPR18Q14330 331 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ITIH4Q14624 930 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 PLCL1Q15111 1095 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 PPP1R7Q15435 360 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 RPE65Q16518 533 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 FASTKD1Q53R41 847 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ANKRD22Q5VYY1 191 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 DUS1LQ6P1R4 473 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 LRRC8BQ6P9F7 803 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 LRRC69Q6ZNQ3 347 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 RBM12BQ8IXT5 1001 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 CFAP206Q8IYR0 622 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 LILRA3Q8N6C8 439 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 OTUD6BQ8N6M0 293 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 OR4L1Q8NH43 312 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 PEX13Q92968 403 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 C12orf66Q96MD2 445 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 DDX47Q9H0S4 455 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 EPB41L1Q9H4G0 881 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 UCK1Q9HA47 277 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 SLC40A1Q9NP59 571 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 CATSPERZQ9NTU4 200 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ANAPC5Q9UJX4 755 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 ACSL5Q9ULC5 683 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 CFAP20Q9Y6A4 193 aaKnown RBP15.8■□□□□ 0.12
COMMD4-206ENST00000562610 CELSR3Q9NYQ7 3312 aa15.8■□□□□ 0.12
COMMD4-206ENST00000562610 A8MU76 341 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 GOLGA8MH3BSY2 632 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 HGSO14964 777 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 TMEM63AO94886 807 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 UBXN7O94888 489 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 MTHFD1P11586 935 aaKnown RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 AMD1P17707 334 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 NMBRP28336 390 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 EIF2S3P41091 472 aaKnown RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 MLLT3P42568 568 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 SQSTM1Q13501 440 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 AARS2Q5JTZ9 985 aaKnown RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 LYPLAL1Q5VWZ2 237 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 CASC4Q6P4E1 433 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 WDR74Q6RFH5 385 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 ZNF248Q8NDW4 579 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 HNRNPLLQ8WVV9 542 aaKnown RBP15.79■□□□□ 0.12
COMMD4-206ENST00000562610 CPT1BQ92523 772 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 RMDN2Q96LZ7 410 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 CCM2Q9BSQ5 444 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 COG4Q9H9E3 785 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 ASIC3Q9UHC3 531 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 SAR1BQ9Y6B6 198 aa15.79■□□□□ 0.12
COMMD4-206ENST00000562610 SDK2Q58EX2 2172 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 CDRT15L2A8MXV6 281 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 QSOX1O00391 747 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 AVILO75366 819 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 AP2A2O94973 939 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 FTH1P02794 183 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 CSTF2P33240 577 aaKnown RBP eCLIP15.78■□□□□ 0.12
COMMD4-206ENST00000562610 ETV5P41161 510 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 MAGEA6P43360 314 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 ABCG1P45844 678 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 GFERP55789 205 aa15.78■□□□□ 0.12
COMMD4-206ENST00000562610 PAPD7Q5XG87 772 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms