RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PRF1P14222 555 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 HALP42357 657 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 LMAN1P49257 510 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 RPL26P61254 145 aaKnown RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 GTF2H3Q13889 308 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 ANO6Q4KMQ2 910 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 PLEKHS1Q5SXH7 462 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 FNBP1LQ5T0N5 605 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 C1orf189Q5VU69 101 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 TMEM220Q6QAJ8 160 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 FAM198BQ6UWH4 519 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 TMC3Q7Z5M5 1100 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 AVL9Q8NBF6 648 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 OR1L3Q8NH93 324 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 ADAMTS17Q8TE56 1095 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 THAP4Q8WY91 577 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 UBXN4Q92575 508 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 ZNF501Q96CX3 271 aaPredicted RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 C12orf66Q96MD2 445 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 TTC25Q96NG3 672 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 INSM2Q96T92 566 aaPredicted RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 PACSIN1Q9BY11 444 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 ZBTB20Q9HC78 741 aaPredicted RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 MLXIPLQ9NP71 852 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 GPR83Q9NYM4 423 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 AIPL1Q9NZN9 384 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 RPL26L1Q9UNX3 145 aaKnown RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 NTNG1Q9Y2I2 539 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 ZNF451Q9Y4E5 1061 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 PCDHGA9Q9Y5G4 932 aaKnown RBP11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 CSAG2Q9Y5P2 127 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 POLQO75417 2590 aa11.4□□□□□ -0.58
NSMCE1-202ENST00000561960 OR5K3A6NET4 321 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 TLCD2A6NGC4 264 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 LRRC10BA6NIK2 292 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 LDB2O43679 373 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 DPM1O60762 260 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 CTSBP07858 339 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 TNFRSF8P28908 595 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 PRKCIP41743 596 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 TUBB4BP68371 445 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 HSD11B2P80365 405 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 ACY1Q03154 408 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 TUBB2AQ13885 445 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 PPP2R5EQ16537 467 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 DEFB110Q30KQ9 67 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 CCDC183Q5T5S1 534 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 C1QL3Q5VWW1 255 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 PPP1R2P3Q6NXS1 205 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 AMZ2Q86W34 360 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 RHOT1Q8IXI2 618 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 PLD5Q8N7P1 536 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 OR4E2Q8NGC2 313 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 INPP5DQ92835 1189 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 IMP4Q96G21 291 aaKnown RBP11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 TSGA13Q96PP4 275 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 TUBB2BQ9BVA1 445 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 GPR87Q9BY21 358 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 SAE1Q9UBE0 346 aaPredicted RBP11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 EPHA6Q9UF33 1036 aa11.39□□□□□ -0.59
NSMCE1-202ENST00000561960 GSAPA4D1B5 854 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 LRRD1A4D1F6 860 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 RGSL1A5PLK6 1076 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 MYO1FO00160 1098 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 MEN1O00255 615 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 VEGFDO43915 354 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 CYP1A2P05177 515 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 CAPN1P07384 714 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 MTHFD1P11586 935 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 VCLP18206 1134 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 POU3F2P20265 443 aaPredicted RBP11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 CDH3P22223 829 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 CES1P23141 567 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 AKT1P31749 480 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 DCDC1P59894 354 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 TYRO3Q06418 890 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 OLIG2Q13516 323 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 AGAP9Q5VTM2 703 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 ARMC6Q6NXE6 501 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 RBM43Q6ZSC3 357 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 TRIM73Q86UV7 250 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 SYTL1Q8IYJ3 562 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 DSELQ8IZU8 1212 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 D2HGDHQ8N465 521 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 BLOC1S5Q8TDH9 187 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 HDAC11Q96DB2 347 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 RMDN2Q96LZ7 410 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 C5orf34Q96MH7 638 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 ZNF830Q96NB3 372 aaPredicted RBP11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 ZNF670Q9BS34 389 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 SLC29A3Q9BZD2 475 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 XKR8Q9H6D3 395 aa11.38□□□□□ -0.59
NSMCE1-202ENST00000561960 CBX8Q9HC52 389 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms