RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PIK3R1P27986 724 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 NDUFS1P28331 727 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 HOXA10P31260 410 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 HOXC9P31274 260 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLC6A6P31641 620 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 GABRA5P31644 462 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 STIP1P31948 543 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 MCM5P33992 734 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 RPS19P39019 145 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 STAT6P42226 847 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 KCNJ4P48050 445 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 LIMS1P48059 325 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 EFNA5P52803 228 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 RABGGTBP53611 331 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 HUNKP57058 714 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ACTR3P61158 418 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SSTP61278 116 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 YBX1P67809 324 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 GBE1Q04446 702 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLC34A1Q06495 639 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 NCBP1Q09161 790 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SREBF2Q12772 1141 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SPP2Q13103 211 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 DNAJC3Q13217 504 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MAD2L1Q13257 205 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SNTB2Q13425 540 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 TNK1Q13470 666 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 NFYCQ13952 458 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 GRM7Q14831 915 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 NR1D2Q14995 579 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MFSD13AQ14CX5 517 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 LARS2Q15031 903 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLC39A14Q15043 492 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 KRT31Q15323 416 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SSX2Q16385 188 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SYT16Q17RD7 645 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ZXDCQ2QGD7 858 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 CCDC57Q2TAC2 916 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CDONQ4KMG0 1287 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ALG10Q5BKT4 473 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ALG10BQ5I7T1 473 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SPATA46Q5T0L3 261 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ZNF385CQ66K41 422 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 TMEM198Q66K66 360 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SULT1C3Q6IMI6 304 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MIS18BP1Q6P0N0 1132 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 KLC3Q6P597 504 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 BLOC1S2Q6QNY1 142 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 RANBP10Q6VN20 620 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 B3GLCTQ6Y288 498 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 NRARPQ7Z6K4 114 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ADAMTSL2Q86TH1 951 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 RTN4RL2Q86UN3 420 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 VASH2Q86V25 355 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 PALB2Q86YC2 1186 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 TMC8Q8IU68 726 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CAMK1DQ8IU85 385 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CROCCP3Q8IVE0 287 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 C1orf87Q8N0U7 546 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 THEM5Q8N1Q8 247 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 UBE2J2Q8N2K1 259 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ZCCHC7Q8N3Z6 543 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 PDCL2Q8N4E4 241 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ZBTB2Q8N680 514 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 TRIML2Q8N7C3 387 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SCCPDHQ8NBX0 429 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CLEC1AQ8NC01 280 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 BEST2Q8NFU1 509 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 OR6C4Q8NGE1 309 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 OR52E1Q8NGJ3 308 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 FAM110DQ8TAY7 271 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 ZNF398Q8TD17 642 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ELP5Q8TE02 316 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MZB1Q8WU39 189 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 TMEM170AQ8WVE7 144 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 OIT3Q8WWZ8 545 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.01□□□□□ -2.09
RTF1-207ENST00000561076 RAD54LQ92698 747 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ULK4Q96C45 1275 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SPDL1Q96EA4 605 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 PHF21BQ96EK2 531 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 DTD2Q96FN9 168 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 LIN37Q96GY3 246 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 THOC3Q96J01 351 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 EPSTI1Q96J88 318 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 DCAF5Q96JK2 942 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 LCORQ96JN0 433 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 ZFYVE19Q96K21 471 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 IFT74Q96LB3 600 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CCDC17Q96LX7 622 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 TCEANC2Q96MN5 208 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLITRK1Q96PX8 696 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 FRG2BQ96QU4 278 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 PRR25Q96S07 402 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MPHOSPH9Q99550 1183 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MNTQ99583 582 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SPAG8Q99932 426 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 DPYSL5Q9BPU6 564 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 C17orf62Q9BQA9 187 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SIKE1Q9BRV8 207 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms