RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 OTUD4Q01804 1114 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNX1-213ENST00000561026 ANKRD20A2Q5SQ80 823 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 ANKRD20A1Q5TYW2 823 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 ANKRD20A3Q5VUR7 823 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 DET1Q7L5Y6 550 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 PPP1R3BQ86XI6 285 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 BEND7Q8N7W2 519 aaPredicted RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 GALNT6Q8NCL4 622 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 OR4K2Q8NGD2 314 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 APOBEC4Q8WW27 367 aaKnown RBP15.87■□□□□ 0.13
SNX1-213ENST00000561026 UBXN4Q92575 508 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 RNF31Q96EP0 1072 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 SLC41A2Q96JW4 573 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 PANX2Q96RD6 677 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 APOL2Q9BQE5 337 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 OSBPL8Q9BZF1 889 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 KCTD3Q9Y597 815 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 DUSP10Q9Y6W6 482 aa15.87■□□□□ 0.13
SNX1-213ENST00000561026 IGHV5-51A0A0C4DH38 117 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 KLHL33A6NCF5 533 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 SOWAHDA6NJG2 315 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 PJA2O43164 708 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 SPAG6O75602 509 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 RBP3P10745 1247 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 MTHFD1P11586 935 aaKnown RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 PSMB4P28070 264 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 PBLDP30039 288 aaPredicted RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 DLSTP36957 453 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 EIF3EP60228 445 aaKnown RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 MSLNQ13421 630 aaPredicted RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 OLIG2Q13516 323 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 PRPSAP1Q14558 356 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 DEFB109BQ30KR1 87 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 ATP1A1-AS1Q5TC04 95 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 C16orf46Q6P387 395 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 CYB5D1Q6P9G0 228 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 PTRH1Q86Y79 214 aaKnown RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 CDKL3Q8IVW4 592 aaPredicted RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 OR2L2Q8NH16 312 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 STAMBPL1Q96FJ0 436 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 INSM2Q96T92 566 aaPredicted RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 ASB8Q9H765 288 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 PDE7BQ9NP56 450 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 IMP3Q9NV31 184 aaKnown RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 FKBPLQ9UIM3 349 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 LNPEPQ9UIQ6 1025 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 CROTQ9UKG9 612 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 ACSL5Q9ULC5 683 aa15.86■□□□□ 0.13
SNX1-213ENST00000561026 MRPS18BQ9Y676 258 aaKnown RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 CFAP20Q9Y6A4 193 aaKnown RBP15.86■□□□□ 0.13
SNX1-213ENST00000561026 UBR5O95071 2799 aaPredicted RBP15.85■□□□□ 0.13
SNX1-213ENST00000561026 MACROD2A1Z1Q3 448 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 CCDC66A2RUB6 948 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 AGAP14A8MT82 685 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 KCNN4O15554 427 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 STK10O94804 968 aaKnown RBP15.85■□□□□ 0.13
SNX1-213ENST00000561026 CRTAMO95727 393 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 FOLR1P15328 257 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 CTNNA2P26232 953 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 NAP1L1P55209 391 aaKnown RBP15.85■□□□□ 0.13
SNX1-213ENST00000561026 RWDD2BP57060 319 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 XIAPP98170 497 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 PLCL1Q15111 1095 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 BCL7AQ4VC05 210 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 DARS2Q6PI48 645 aaKnown RBP15.85■□□□□ 0.13
SNX1-213ENST00000561026 TMTC1Q8IUR5 882 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 NAT14Q8WUY8 206 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 ZFPM2Q8WW38 1151 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 LINC00615Q96LM1 132 aaPredicted RBP15.85■□□□□ 0.13
SNX1-213ENST00000561026 SPATA13Q96N96 652 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 FAM118BQ9BPY3 351 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 WWP1Q9H0M0 922 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 PADI1Q9ULC6 663 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 PCDHB3Q9Y5E6 796 aa15.85■□□□□ 0.13
SNX1-213ENST00000561026 OR5K3A6NET4 321 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 BTNL10A8MVZ5 291 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 SGTAO43765 313 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 TJP3O95049 919 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 IPO7O95373 1038 aaKnown RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 CCNYL3P0C7X3 344 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 PDE1BQ01064 536 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 TUBB3Q13509 450 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 KCNAB1Q14722 419 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 DENND5AQ6IQ26 1287 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 BPHLQ86WA6 291 aaPredicted RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 KMT5CQ86Y97 462 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 SIDT2Q8NBJ9 832 aaKnown RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 OR13C4Q8NGS5 318 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 C9orf43Q8TAL5 461 aaPredicted RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 CCDC110Q8TBZ0 833 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 ALG3Q92685 438 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 ABHD17AQ96GS6 310 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 C12orf66Q96MD2 445 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 FCRL4Q96PJ5 515 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 PPP1R2P1Q96PQ5 205 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 CD180Q99467 661 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 MAP3K3Q99759 626 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 C19orf43Q9BQ61 176 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms