RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KLK15Q9H2R5 256 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 FBXO44Q9H4M3 255 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 LDAHQ9H6V9 325 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 RDH14Q9HBH5 336 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 CSNK1G1Q9HCP0 422 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SLAMF7Q9NQ25 335 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 MRPL40Q9NQ50 206 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 CCM2LQ9NUG4 571 aaPredicted RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 OCIAD1Q9NX40 245 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 AGO2Q9UKV8 859 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 ITGA11Q9UKX5 1188 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 DNM3Q9UQ16 869 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ERVW-1Q9UQF0 538 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 NEU2Q9Y3R4 380 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 KIF3AQ9Y496 699 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 PCDHGA9Q9Y5G4 932 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 ACANP16112 2415 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SCN1AP35498 2009 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 IGHV5-10-1A0A0J9YXX1 117 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 A0A1W2PS29 197 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 A6NNZ2 444 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 B4E171 279 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 IL18RAPO95256 599 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 F9P00740 461 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 ANXA6P08133 673 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 SRPRAP08240 638 aaKnown RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 HMGB1P09429 215 aaKnown RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 PDCP20941 246 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 HTR1EP28566 365 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 HNRNPH3P31942 346 aaKnown RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 SOX5P35711 763 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 FOLR3P41439 243 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 TSPAN7P41732 249 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 RABIFP47224 123 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 PFN3P60673 137 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 ST8SIA6P61647 398 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 GTF2BQ00403 316 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 CDK18Q07002 472 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 FOXD4Q12950 439 aaPredicted RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 PDE1CQ14123 709 aaPredicted RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 ELAVL3Q14576 367 aaKnown RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 FSCBQ5H9T9 825 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 LVRNQ6Q4G3 990 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 MMS22LQ6ZRQ5 1243 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 PTAR1Q7Z6K3 402 aaPredicted RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 FITM2Q8N6M3 262 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 OR6C4Q8NGE1 309 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 OR5B17Q8NGF7 314 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 FIBINQ8TAL6 211 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 NDRG1Q92597 394 aaKnown RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 KIAA1143Q96AT1 154 aaPredicted RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 RTP4Q96DX8 246 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 C14orf79Q96F83 325 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 MARS2Q96GW9 593 aaKnown RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 CGRRF1Q99675 332 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 SLC25A23Q9BV35 468 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 ADI1Q9BV57 179 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 ASPSCR1Q9BZE9 553 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 MTMR12Q9C0I1 747 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 MCCC2Q9HCC0 563 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 CHST11Q9NPF2 352 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 DMAP1Q9NPF5 467 aaPredicted RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 SLC39A1Q9NY26 324 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 CLIC5Q9NZA1 410 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 LRIT1Q9P2V4 623 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 OSGIN2Q9Y236 505 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 POLHQ9Y253 713 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 NTNG1Q9Y2I2 539 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 TMEM184BQ9Y519 407 aaPredicted RBP3.78□□□□□ -1.8
HERC1-211ENST00000560983 PCDHGB6Q9Y5F9 930 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 RYR3Q15413 4870 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 POLEQ07864 2286 aa3.78□□□□□ -1.8
HERC1-211ENST00000560983 GOLGA6L7A0A1B0GV03 622 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 PP2D1A8MPX8 630 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 A8MXQ7 604 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 H0YCG3 227 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 C19orf84I3L1E1 186 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CEACAM4O75871 244 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 PRKD3O94806 890 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CPNE6O95741 557 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 STSP08842 583 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 PLA2G4BP0C869 781 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CD1CP29017 333 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CSTF2P33240 577 aaKnown RBP eCLIP3.77□□□□□ -1.81
HERC1-211ENST00000560983 KRT2P35908 639 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 STK19P49842 368 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 CCL11P51671 97 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 LIMK2P53671 638 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 SLC12A3P55017 1021 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 MAP3K7CLP57077 242 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 SCAND1P57086 179 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 OR1D5P58170 312 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 ECT2LQ008S8 904 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 FOXM1Q08050 763 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 IL17AQ16552 155 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 MPP7Q5T2T1 576 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CERCAMQ5T4B2 595 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 DCAF12Q5T6F0 453 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms