RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.09■□□□□ 0.49
TPM1-226ENST00000560959 MYO1FO00160 1098 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 POP7O75817 140 aaKnown RBP18.08■□□□□ 0.48
TPM1-226ENST00000560959 IGHEP01854 428 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 HADHAP40939 763 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 CDK18Q07002 472 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 ADCY2Q08462 1091 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 PPIDQ08752 370 aaKnown RBP18.08■□□□□ 0.48
TPM1-226ENST00000560959 SLC10A2Q12908 348 aaPredicted RBP18.08■□□□□ 0.48
TPM1-226ENST00000560959 ATP13A5Q4VNC0 1218 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 ZDHHC20Q5W0Z9 365 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 SRRM1Q8IYB3 904 aaKnown RBP18.08■□□□□ 0.48
TPM1-226ENST00000560959 KCTD6Q8NC69 237 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 CCNYQ8ND76 341 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 IMP4Q96G21 291 aaKnown RBP18.08■□□□□ 0.48
TPM1-226ENST00000560959 RANBP9Q96S59 729 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 DHRS4Q9BTZ2 278 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 ZCCHC2Q9C0B9 1178 aaKnown RBP18.08■□□□□ 0.48
TPM1-226ENST00000560959 HSD3B7Q9H2F3 369 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 ANAPC7Q9UJX3 599 aa18.08■□□□□ 0.48
TPM1-226ENST00000560959 KCNK1O00180 336 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 HNRNPRO43390 633 aaKnown RBP18.07■□□□□ 0.48
TPM1-226ENST00000560959 ALPPP05187 535 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 PIRTP0C851 137 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 MTHFD1P11586 935 aaKnown RBP18.07■□□□□ 0.48
TPM1-226ENST00000560959 HMGCLP35914 325 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 GBE1Q04446 702 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 LYPLAL1Q5VWZ2 237 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 METRNLQ641Q3 311 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 E4F1Q66K89 784 aaPredicted RBP18.07■□□□□ 0.48
TPM1-226ENST00000560959 ARMC6Q6NXE6 501 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 NT5DC3Q86UY8 548 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 RAB43Q86YS6 212 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 BEND7Q8N7W2 519 aaPredicted RBP18.07■□□□□ 0.48
TPM1-226ENST00000560959 GDAP1Q8TB36 358 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 CLIP3Q96DZ5 547 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 MOCOSQ96EN8 888 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 FER1L6-AS2Q96M78 137 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 C1GALT1Q9NS00 363 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 PCMTD2Q9NV79 361 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 ANO10Q9NW15 660 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 ENTPD4Q9Y227 616 aa18.07■□□□□ 0.48
TPM1-226ENST00000560959 COPG1Q9Y678 874 aaKnown RBP18.07■□□□□ 0.48
TPM1-226ENST00000560959 POLEQ07864 2286 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 KLHL33A6NCF5 533 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 IPO13O94829 963 aaKnown RBP18.06■□□□□ 0.48
TPM1-226ENST00000560959 KPNA2P52292 529 aaKnown RBP18.06■□□□□ 0.48
TPM1-226ENST00000560959 ATP1A4Q13733 1029 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 SSPNQ14714 243 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 NCF4Q15080 339 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 ATP13A4Q4VNC1 1196 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 LDLRAP1Q5SW96 308 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 FAM198BQ6UWH4 519 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 SYTL1Q8IYJ3 562 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 PQLC3Q8N755 202 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 ST6GALNAC3Q8NDV1 305 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 TM9SF4Q92544 642 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 BTBD6Q96KE9 485 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 ZNF830Q96NB3 372 aaPredicted RBP18.06■□□□□ 0.48
TPM1-226ENST00000560959 THAP2Q9H0W7 228 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 SLC25A51Q9H1U9 297 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 TRABDQ9H4I3 376 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 CBX8Q9HC52 389 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
TPM1-226ENST00000560959 PADI2Q9Y2J8 665 aa18.06■□□□□ 0.48
TPM1-226ENST00000560959 FBN2P35556 2912 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 OR6C74A6NCV1 312 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 MATN2O00339 956 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 CYP1A2P05177 515 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 SSR1P43307 286 aaKnown RBP18.05■□□□□ 0.48
TPM1-226ENST00000560959 SOX8P57073 446 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 ABRQ12979 859 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 ZBTB17Q13105 803 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 MYBPC3Q14896 1274 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 PRAMEF17Q5VTA0 474 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 FAM83HQ6ZRV2 1179 aaPredicted RBP18.05■□□□□ 0.48
TPM1-226ENST00000560959 RASGEF1AQ8N9B8 481 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 LRRN4Q8WUT4 740 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 C17orf62Q9BQA9 187 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 KIR3DX1Q9H7L2 352 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 ACTR5Q9H9F9 607 aaPredicted RBP18.05■□□□□ 0.48
TPM1-226ENST00000560959 IL26Q9NPH9 171 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 AGPAT4Q9NRZ5 378 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 IMP3Q9NV31 184 aaKnown RBP18.05■□□□□ 0.48
TPM1-226ENST00000560959 SOHLH2Q9NX45 425 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 SLC24A2Q9UI40 661 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 SERTAD3Q9UJW9 196 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 ACSL5Q9ULC5 683 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 PSMD13Q9UNM6 376 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 OTOGQ6ZRI0 2925 aa18.05■□□□□ 0.48
TPM1-226ENST00000560959 NDST3O95803 873 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 SLC4A1P02730 911 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 CD63P08962 238 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 HBQ1P09105 142 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 PYGMP11217 842 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 PER3P56645 1201 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 XRCC4Q13426 336 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 NFE2L1Q14494 772 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 ZNF789Q5FWF6 425 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms