RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 CCDC78A2IDD5 438 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 KLHL33A6NCF5 533 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 POM121BA6NF01 834 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PRMT5O14744 637 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 TNFRSF10CO14798 259 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 VEGFDO43915 354 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CDH16O75309 829 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SASH3O75995 380 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 HAUS5O94927 633 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ESR1P03372 595 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GSTM1P09488 218 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PRSS56P0CW18 603 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 BCKDHBP21953 392 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CNTFP26441 200 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 HOXD12P35452 270 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PPARGP37231 505 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 NSG1P42857 185 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PXNP49023 591 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SERPINB9P50453 376 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 LIMK2P53671 638 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 YPEL5P62699 121 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 TMPRSS15P98073 1019 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CDK3Q00526 305 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GSTM4Q03013 218 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CSTF1Q05048 431 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CTBP1Q13363 440 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 THOC5Q13769 683 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ELOAQ14241 798 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GBX1Q14549 363 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 INPP5AQ14642 412 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 IRF4Q15306 451 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ZKSCAN8Q15776 578 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SWI5Q1ZZU3 235 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PLK5Q496M5 336 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 BCL7AQ4VC05 210 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 KHDC1Q4VXA5 237 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 FASTKD1Q53R41 847 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ZNF789Q5FWF6 425 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 TMEM31Q5JXX7 168 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 LDLRAP1Q5SW96 308 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GPRC6AQ5T6X5 926 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PMS2CLQ68D20 193 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ZNF470Q6ECI4 717 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 XKR5Q6UX68 686 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 FAM151BQ6UXP7 276 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 KYAT3Q6YP21 454 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GCNT7Q6ZNI0 430 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 MICALCLQ6ZW33 695 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 BTLAQ7Z6A9 289 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PTAR1Q7Z6K3 402 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ADGRG6Q86SQ4 1221 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 FAM124AQ86V42 546 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SERPINA9Q86WD7 417 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CACUL1Q86Y37 369 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 DCP2Q8IU60 420 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 RASGRP3Q8IV61 690 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 DENND6AQ8IWF6 608 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 RBFAQ8N0V3 343 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PAF1Q8N7H5 531 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PPM1NQ8N819 430 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 MFSD2AQ8NA29 543 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 UBLCP1Q8WVY7 318 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 CDKL2Q92772 493 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 FUBP1Q96AE4 644 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PGM2Q96G03 612 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 HIC2Q96JB3 615 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SPACA7Q96KW9 195 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 LINC00615Q96LM1 132 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 C20orf173Q96LM9 149 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ZIM3Q96PE6 472 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PAFAH2Q99487 392 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 COPS8Q99627 209 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GPR22Q99680 433 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 RBBP8Q99708 897 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 AARSD1Q9BTE6 412 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 APOOQ9BUR5 198 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SPATA16Q9BXB7 569 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GPR174Q9BXC1 333 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 TPSD1Q9BZJ3 242 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ASB8Q9H765 288 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 IARS2Q9NSE4 1012 aaKnown RBP5.4□□□□□ -1.54
ZEB1-220ENST00000560909 FAM53CQ9NYF3 392 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 IL1RAPL1Q9NZN1 696 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 ZFATQ9P243 1243 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 GULP1Q9UBP9 304 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PLAAQ9Y263 795 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SLC17A4Q9Y2C5 497 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 PCDHB1Q9Y5F3 818 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 COMMD10Q9Y6G5 202 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 SLC30A1Q9Y6M5 507 aa5.4□□□□□ -1.54
ZEB1-220ENST00000560909 OTOGLQ3ZCN5 2332 aa5.4□□□□□ -1.55
ZEB1-220ENST00000560909 CABIN1Q9Y6J0 2220 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SPTY2D1-AS1A0A0U1RR47 76 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 C17orf113A0A1B0GUU1 675 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 EXOC1LA0A1B0GW35 172 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 GOLGA8KD6RF30 607 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 H3BMM5 538 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 GOLGA8TH3BQL2 631 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 FPGTO14772 594 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RASGRF2O14827 1237 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms