RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 MYMKA6NI61 221 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 FADS2P1A8MWK0 482 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PRR33A8MZF0 331 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 E9PMD0 336 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 H7C0C1 242 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 RPP40O75818 363 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CYP2D6P10635 497 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ACAT1P24752 427 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NTSR1P30989 418 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 THBS2P35442 1172 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ADCY8P40145 1251 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 STX1BP61266 288 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 KLHL38Q2WGJ6 581 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 FAM47AQ5JRC9 791 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 C11orf88Q6PI97 169 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CLEC2AQ6UVW9 174 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CYP20A1Q6UW02 462 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 SERPINA13PQ6UXR4 307 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 IDO2Q6ZQW0 420 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 AKAP14Q86UN6 197 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 KRT73Q86Y46 540 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CLIP4Q8N3C7 705 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 IL17RCQ8NAC3 791 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ACDQ96AP0 544 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PDLIM5Q96HC4 596 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 TXNDC15Q96J42 360 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NACC1Q96RE7 527 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 WNT8AQ9H1J5 351 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CXorf21Q9HAI6 301 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 SCUBE2Q9NQ36 999 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 G6PC2Q9NQR9 355 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NDFIP2Q9NV92 336 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CNIH4Q9P003 139 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 POLLQ9UGP5 575 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CNTNAP5Q8WYK1 1306 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 C1orf232A0A0U1RR37 186 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 CCRL2O00421 344 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PRLP01236 227 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 HMGCRP04035 888 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 AMY1AP04745 511 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 KRT5P13647 590 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 RPS2P15880 293 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 DDCP20711 480 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 IL1R2P27930 398 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 HPCAL1P37235 193 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 GPD2P43304 727 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NKX2-5P52952 324 aaPredicted RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 METAP1P53582 386 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 UCP3P55916 312 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 GMFBP60983 142 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PRKCQQ04759 706 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 RUNX1T1Q06455 604 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 MGAT2Q10469 447 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 TRA2AQ13595 282 aaKnown RBP eCLIP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 GAS6Q14393 721 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PPP6R3Q5H9R7 873 aaPredicted RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 RTP2Q5QGT7 225 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 TCHHL1Q5QJ38 904 aaPredicted RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NDUFAF5Q5TEU4 345 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PRAMEF18Q5VWM3 479 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 EEF1DP3Q658K8 133 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ZFP1Q6P2D0 407 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 KIAA1324Q6UXG2 1013 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 MIB1Q86YT6 1006 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 HPS6Q86YV9 775 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ZCCHC9Q8N567 271 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 GALNT6Q8NCL4 622 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 PDPRQ8NCN5 879 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 REPS2Q8NFH8 660 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 IFI44Q8TCB0 444 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 TUBGCP3Q96CW5 907 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF347Q96SE7 839 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC29A1Q99808 456 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NAA11Q9BSU3 229 aaPredicted RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 THAP2Q9H0W7 228 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 DNMT3BQ9UBC3 853 aaKnown RBP6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ATPIF1Q9UII2 106 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 DNMT3LQ9UJW3 386 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 ITGA11Q9UKX5 1188 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 SARDHQ9UL12 918 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 NAALAD2Q9Y3Q0 740 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 DYRK1BQ9Y463 629 aa6.67□□□□□ -1.34
TSPAN3-209ENST00000560715 RGPD3A6NKT7 1758 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 RGPD4Q7Z3J3 1758 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PSME4Q14997 1843 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 E5RJQ4 531 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 GPC4O75487 556 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 GCATO75600 419 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CLPXO76031 633 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 DIRAS3O95661 229 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PROCP04070 461 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ERBB2P04626 1255 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CD1AP06126 327 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 SELLP14151 372 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 BGNP21810 368 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CCNCP24863 283 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CALML3P27482 149 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PCSK1P29120 753 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms