RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PTP4A2Q12974 167 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 SUN3Q8TAQ9 357 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CPT1BQ92523 772 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CXorf56Q9H5V9 222 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 SLC17A7Q9P2U7 560 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 DYTNA2CJ06 578 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 BBIP1A8MTZ0 92 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 SIN3BO75182 1162 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 LYPLA1O75608 230 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 COL9A3Q14050 684 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 KCTD19Q17RG1 926 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 HGSNATQ68CP4 663 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 ALYREFQ86V81 257 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 POF1BQ8WVV4 589 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 APC2O95996 2303 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PSMG1O95456 288 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 NR2F6P10588 404 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 MPSTP25325 297 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PPM1JQ5JR12 505 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 IL23RQ5VWK5 629 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 OR7A2PQ8NGA2 310 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 PMEPA1Q969W9 287 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 POLR3BQ9NW08 1133 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-208ENST00000560371 CDH7Q9ULB5 785 aa13.31□□□□□ -0.28
TRAF3-208ENST00000560371 DNM1LO00429 736 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 TNFP01375 233 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 HOXB6P17509 224 aaKnown RBP13.3□□□□□ -0.28
TRAF3-208ENST00000560371 TCEA1P23193 301 aaKnown RBP13.3□□□□□ -0.28
TRAF3-208ENST00000560371 PLA2G16P53816 162 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 BPIFB1Q8TDL5 484 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 HBEGFQ99075 208 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 EPB41L1Q9H4G0 881 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 C9IYK1 514 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 MYL9P24844 172 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 GJA9P57773 515 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 TTC27Q6P3X3 843 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 AMER2Q8N7J2 671 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 IRF7Q92985 503 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 DTLQ9NZJ0 730 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 F5P12259 2224 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 CCNFP41002 786 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 PGDP52209 483 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 MAPK10P53779 464 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 CLCQ05315 142 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 FSTL4Q6MZW2 842 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 CXXC5Q7LFL8 322 aaKnown RBP13.3□□□□□ -0.28
TRAF3-208ENST00000560371 SNX20Q7Z614 316 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 DAW1Q8N136 415 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 OR2AG1Q9H205 316 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 MAGEL2Q9UJ55 1249 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 NUP205Q92621 2012 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 C9J4A7 227 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 LIMK2P53671 638 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 RFX4Q33E94 735 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 INTS10Q9NVR2 710 aaKnown RBP13.3□□□□□ -0.28
TRAF3-208ENST00000560371 CMTM6Q9NX76 183 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 CPED1A4D0V7 1026 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 HSPB3Q12988 150 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 BRAT1Q6PJG6 821 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 CRYBG2Q8N1P7 616 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 B3GALT2O43825 422 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 STAT5AP42229 794 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 ARL5AQ9Y689 179 aa13.3□□□□□ -0.28
TRAF3-208ENST00000560371 SLC7A4O43246 635 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 LCP2Q13094 533 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 UAP1L1Q3KQV9 507 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 CADM2Q8N3J6 435 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 SETD7Q8WTS6 366 aaKnown RBP13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TIPRLO75663 272 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 CAMK1Q14012 370 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 ARL13AQ5H913 290 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TMEM63BQ5T3F8 832 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 PHF19Q5T6S3 580 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 CLEC6AQ6EIG7 209 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 GJD3Q8N144 294 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RAB11FIP5Q9BXF6 653 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 SDCBP2Q9H190 292 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 CCSER2Q9H7U1 834 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 HMG20AQ9NP66 347 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 HOXB2P14652 356 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 CCNIQ14094 377 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 FASTKD3Q14CZ7 662 aaKnown RBP13.29□□□□□ -0.28
TRAF3-208ENST00000560371 FBXO15Q8NCQ5 510 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TDRD1Q9BXT4 1180 aaKnown RBP13.29□□□□□ -0.28
TRAF3-208ENST00000560371 WDR55Q9H6Y2 383 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-208ENST00000560371 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 DPYSL2Q16555 572 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 HIPK1Q86Z02 1210 aa13.29□□□□□ -0.28
TRAF3-208ENST00000560371 RASGRP3Q8IV61 690 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms