RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CAMK1DQ8IU85 385 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 PLPP6Q8IY26 295 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 FIBCD1Q8N539 461 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 ZBTB2Q8N680 514 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 FAM156AQ8NDB6 213 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 METTL6Q8TCB7 284 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 TMEM125Q96AQ2 219 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 EME1Q96AY2 570 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 SLCO4A1Q96BD0 722 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 ECHDC3Q96DC8 303 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 SCRN2Q96FV2 425 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 LMLNQ96KR4 655 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 ZNF641Q96N77 438 aaPredicted RBP7.97□□□□□ -1.13
SMAD3-212ENST00000559937 MCCC1Q96RQ3 725 aaPredicted RBP7.97□□□□□ -1.13
SMAD3-212ENST00000559937 TSC22D3Q99576 134 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 NTMT1Q9BV86 223 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 EMILIN2Q9BXX0 1053 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 SLC2A11Q9BYW1 496 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 SLC29A3Q9BZD2 475 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 TM6SF2Q9BZW4 377 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 CIPCQ9C0C6 399 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 PCDHAC1Q9H158 963 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 SARS2Q9NP81 518 aaKnown RBP7.97□□□□□ -1.13
SMAD3-212ENST00000559937 IL26Q9NPH9 171 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 TMEM39AQ9NV64 488 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 CMTM6Q9NX76 183 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 ZDHHC3Q9NYG2 299 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 TRPS1Q9UHF7 1281 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 CRLS1Q9UJA2 301 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 CNOT6Q9ULM6 557 aaKnown RBP7.97□□□□□ -1.13
SMAD3-212ENST00000559937 AP3M1Q9Y2T2 418 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 TIMM22Q9Y584 194 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
SMAD3-212ENST00000559937 MYOFQ9NZM1 2061 aa7.96□□□□□ -1.13
SMAD3-212ENST00000559937 IGLV3-16A0A075B6K0 115 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CCDC154A6NI56 674 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 NCF1BA6NI72 391 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 NCF1CA8MVU1 366 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 WASH3PC4AMC7 463 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 K7ERQ8 282 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 LEFTY2O00292 366 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 SLC28A1O00337 649 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 OR7A17O14581 309 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 GRM6O15303 877 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 TGM5O43548 720 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 RGS14O43566 566 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 SLC25A14O95258 325 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CLDN7O95471 211 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 ADH1AP07327 375 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 FAM58BPP0C7Q3 252 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PABPC4LP0CB38 370 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 ZCCHC18P0CG32 403 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MPC1LP0DKB6 136 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 NCF1P14598 390 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 TCF3P15923 654 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 BPIP17213 487 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 ATP6V1B2P21281 511 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 IL10P22301 178 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 JAK1P23458 1154 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PRDX3P30048 256 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 DIO3P55073 304 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 DEFB103AP81534 67 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CYP4F8P98187 520 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 ECT2LQ008S8 904 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MAP7Q14244 749 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 GBX1Q14549 363 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CHRNA6Q15825 494 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MYLK3Q32MK0 819 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 VPS26BQ4G0F5 336 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MTX3Q5HYI7 312 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PITRM1Q5JRX3 1037 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 GPRC6AQ5T6X5 926 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PPP4R4Q6NUP7 873 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 LETMD1Q6P1Q0 360 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 FAM151BQ6UXP7 276 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 Q6ZSR9 355 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 FKBP9P1Q75LS8 142 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PROSER1Q86XN7 944 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CHERPQ8IWX8 916 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 BBS7Q8IWZ6 715 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 FAM9CQ8IZT9 166 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 TCAIMQ8N3R3 496 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 AADATQ8N5Z0 425 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PAF1Q8N7H5 531 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CDYL2Q8N8U2 506 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MFSD2AQ8NA29 543 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 GLB1L3Q8NCI6 653 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 PAPD5Q8NDF8 572 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 OR2T11Q8NH01 316 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 AUTS2Q8WXX7 1259 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 LRTOMTQ8WZ04 291 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 NCSTNQ92542 709 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 POP5Q969H6 163 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MAGEB10Q96LZ2 347 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 MRPS26Q9BYN8 205 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 CD244Q9BZW8 370 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 YIPF3Q9GZM5 350 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 SUV39H2Q9H5I1 410 aa7.96□□□□□ -1.14
SMAD3-212ENST00000559937 NOL11Q9H8H0 719 aaKnown RBP7.96□□□□□ -1.14
SMAD3-212ENST00000559937 RAD18Q9NS91 495 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms