RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CERS6Q6ZMG9 384 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 PRR23BQ6ZRT6 265 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 C10orf107Q8IVU9 208 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 FAM174AQ8TBP5 190 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 ULK4Q96C45 1275 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 C7orf26Q96N11 449 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 TMEM74BQ9NUR3 256 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 PILRBQ9UKJ0 227 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 MED16Q9Y2X0 877 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 OAS3Q9Y6K5 1087 aaKnown RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 SDK1Q7Z5N4 2213 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 TOR1BO14657 336 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 SLC25A14O95258 325 aaPredicted RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 TGDSO95455 350 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 WNT1P04628 370 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 KCNA4P22459 653 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 CD38P28907 300 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 RABIFP47224 123 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 OCRLQ01968 901 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 KHDC1Q4VXA5 237 aaKnown RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 TPRG1LQ5T0D9 272 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 TMEM207Q6UWW9 146 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 ZYG11AQ6WRX3 759 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 Q6ZSR6 202 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 TAS2R42Q7RTR8 314 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 TBC1D1Q86TI0 1168 aaPredicted RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 TRIM74Q86UV6 250 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 PHYKPLQ8IUZ5 450 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 FSTL5Q8N475 847 aaPredicted RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 MFSD2AQ8NA29 543 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 DDHD1Q8NEL9 900 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 HEXDCQ8WVB3 486 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.3■□□□□ 0.2
TPM1-219ENST00000559397 CCDC97Q96F63 343 aaPredicted RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 BIRC8Q96P09 236 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 GPAMQ9HCL2 828 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 AASDHPPTQ9NRN7 309 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 PHPT1Q9NRX4 125 aaPredicted RBP16.3■□□□□ 0.2
TPM1-219ENST00000559397 ZDHHC3Q9NYG2 299 aa16.3■□□□□ 0.2
TPM1-219ENST00000559397 ATXN2Q99700 1313 aaKnown RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 IGLV3-16A0A075B6K0 115 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 BCAT2O15382 392 aaPredicted RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 DNAJC6O75061 913 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 SERPINE1P05121 402 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 LTA4HP09960 611 aaKnown RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 GRK2P25098 689 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 KPNA2P52292 529 aaKnown RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 HNRNPH2P55795 449 aaKnown RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 KIAA1024LP59773 190 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 STX3Q13277 289 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 FAM83EQ2M2I3 478 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 AGAP9Q5VTM2 703 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 LYPLAL1Q5VWZ2 237 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 IQCHQ86VS3 1027 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 SLC22A18ASQ8N1D0 253 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 ANKRD49Q8WVL7 239 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 MRPL57Q9BQC6 102 aaKnown RBP16.29■□□□□ 0.2
TPM1-219ENST00000559397 ARL2BPQ9Y2Y0 163 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 COMMD10Q9Y6G5 202 aa16.29■□□□□ 0.2
TPM1-219ENST00000559397 CACNA1HO95180 2353 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 UBA6A0AVT1 1052 aaPredicted RBP16.28■□□□□ 0.2
TPM1-219ENST00000559397 CACNB4O00305 520 aaPredicted RBP16.28■□□□□ 0.2
TPM1-219ENST00000559397 MTX2O75431 263 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 THEGLP0DJG4 465 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 PKMP14618 531 aaKnown RBP16.28■□□□□ 0.2
TPM1-219ENST00000559397 FMO4P31512 558 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 B4GALNT1Q00973 533 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 NFATC4Q14934 902 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 LPAL2Q16609 132 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 LDLRAP1Q5SW96 308 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 PIM3Q86V86 326 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 KLHDC7BQ96G42 594 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 COPS8Q99627 209 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 BOCQ9BWV1 1114 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 P2RY12Q9H244 342 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 MRPL46Q9H2W6 279 aaKnown RBP16.28■□□□□ 0.2
TPM1-219ENST00000559397 TRIM39Q9HCM9 518 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 OXSMQ9NWU1 459 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 KLHL14Q9P2G3 628 aa16.28■□□□□ 0.2
TPM1-219ENST00000559397 A0A1B0GTW7 788 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 TMEM202A6NGA9 273 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 TK2O00142 265 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 OR1I1O60431 355 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 ESR1P03372 595 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 CCDC166P0CW27 439 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 MYL2P10916 166 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 RALBP11234 206 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 GLRBP48167 497 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 PRKAA2P54646 552 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 OVGP1Q12889 678 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 TMEM115Q12893 351 aaPredicted RBP16.27■□□□□ 0.2
TPM1-219ENST00000559397 CSHL1Q14406 222 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 TECRLQ5HYJ1 363 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 CTSL3PQ5NE16 218 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 LAYNQ6UX15 382 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms