RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CPED1A4D0V7 1026 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 ESPNB1AK53 854 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 NTN3O00634 580 aaPredicted RBP11.21□□□□□ -0.61
SNX1-204ENST00000559061 B4GAT1O43505 415 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 HYAL3O43820 417 aaPredicted RBP11.21□□□□□ -0.61
SNX1-204ENST00000559061 PIAS1O75925 651 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 AP2A2O94973 939 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 GP1BAP07359 652 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNX1-204ENST00000559061 PDHA2P29803 388 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CCR7P32248 378 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CSF2RBP32927 897 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 NSG1P42857 185 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 FASLGP48023 281 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 PREPP48147 710 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 PLTPP55058 493 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 ARL4CP56559 192 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 DAB2P98082 770 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 GUCY2DQ02846 1103 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CTBP1Q13363 440 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 LONRF1Q17RB8 773 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 HSP90AA5PQ58FG0 334 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 SPANXN3Q5MJ09 141 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 ZNF470Q6ECI4 717 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CAPRIN2Q6IMN6 1127 aaKnown RBP11.21□□□□□ -0.61
SNX1-204ENST00000559061 CERS6Q6ZMG9 384 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 SPRED1Q7Z699 444 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 PDIK1LQ8N165 341 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CHCHD4Q8N4Q1 142 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNX1-204ENST00000559061 FBXO36Q8NEA4 188 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 GIMAP7Q8NHV1 300 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CFAP36Q96G28 342 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 DCUN1D1Q96GG9 259 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 ZNF514Q96K75 400 aaPredicted RBP11.21□□□□□ -0.61
SNX1-204ENST00000559061 SLC30A3Q99726 388 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CCDC3Q9BQI4 270 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 CCM2Q9BSQ5 444 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 MCMBPQ9BTE3 642 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 WWP1Q9H0M0 922 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 RAB17Q9H0T7 212 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 MOCS1Q9NZB8 636 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 FAM8A1Q9UBU6 413 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 KLK13Q9UKR3 277 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 PSMD13Q9UNM6 376 aa11.21□□□□□ -0.61
SNX1-204ENST00000559061 UTP11Q9Y3A2 253 aaKnown RBP11.21□□□□□ -0.61
SNX1-204ENST00000559061 PRMT5O14744 637 aaPredicted RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 NUDT21O43809 227 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 OPA1O60313 960 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 NIPSNAP2O75323 286 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 GLB1P16278 677 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 ITGB6P18564 788 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 DEKP35659 375 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 ABCG1P45844 678 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 CCL7P80098 99 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 ILKQ13418 452 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 FRG1Q14331 258 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 GBX1Q14549 363 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 RPE65Q16518 533 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 CCDC157Q569K6 752 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 LYPLAL1Q5VWZ2 237 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 CNSTQ6PJW8 725 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 ZBED8Q8IZ13 594 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 C2CD4AQ8NCU7 369 aaPredicted RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 BBOF1Q8ND07 529 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 HM13Q8TCT9 377 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 HEXDCQ8WVB3 486 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 SCG3Q8WXD2 468 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 LRRC39Q96DD0 335 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 CERS2Q96G23 380 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 TTC25Q96NG3 672 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 INSM2Q96T92 566 aaPredicted RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 SARS2Q9NP81 518 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 SAYSD1Q9NPB0 183 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 FBXO6Q9NRD1 293 aaPredicted RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 IARS2Q9NSE4 1012 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 OGFRQ9NZT2 677 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 LRIT1Q9P2V4 623 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 CPNE7Q9UBL6 633 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 ZC3H7BQ9UGR2 993 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 PSAT1Q9Y617 370 aa11.2□□□□□ -0.62
SNX1-204ENST00000559061 CFAP20Q9Y6A4 193 aaKnown RBP11.2□□□□□ -0.62
SNX1-204ENST00000559061 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 UNC13CQ8NB66 2214 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 PMS2P1A4D2B8 440 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 FAM149AA5PLN7 773 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CXorf49A8MYA2 514 aaPredicted RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 KCNJ13O60928 360 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 GPC4O75487 556 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 HAUS5O94927 633 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 POLBP06746 335 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 TPBGLP0DKB5 382 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 RALBP11234 206 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 PNLIPP16233 465 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms