RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 PIRTP0C851 137 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 PRF1P14222 555 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 MX2P20592 715 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 AGXTP21549 392 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 PRKAA1Q13131 559 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 MMRN1Q13201 1228 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 NCF4Q15080 339 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 PAFAH1B3Q15102 231 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 ASIC2Q16515 512 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 PRAMEF17Q5VTA0 474 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 SP5Q6BEB4 398 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 TXNRD3NBQ6F5E7 133 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 TMC3Q7Z5M5 1100 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 ST6GALNAC3Q8NDV1 305 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 SYT11Q9BT88 431 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 TLR10Q9BXR5 811 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 UNKQ9C0B0 810 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 ACTR5Q9H9F9 607 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 SYTL2Q9HCH5 934 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 MAGEE1Q9HCI5 957 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
TSPAN3-204ENST00000558394 POLEQ07864 2286 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 PRSS44E7EML9 344 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 CDH3P22223 829 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 GRNP28799 593 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 MYBPC3Q14896 1274 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 HADHQ16836 314 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 KHDC1Q4VXA5 237 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 NCBP2-AS2Q69YL0 99 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 C11orf96Q7Z7L8 435 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 MCEMP1Q8IX19 187 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 GALNT16Q8N428 558 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 VPS35Q96QK1 796 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 DPH2Q9BQC3 489 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 XPO4Q9C0E2 1151 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 HAUS4Q9H6D7 363 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 LIMA1Q9UHB6 759 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 SERTAD3Q9UJW9 196 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 MYO6Q9UM54 1294 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 BTRCQ9Y297 605 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 SEC16AO15027 2179 aa17.37■□□□□ 0.37
TSPAN3-204ENST00000558394 HEATR9A2RTY3 570 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 OR6C74A6NCV1 312 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 TMEM150CB9EJG8 249 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 POP7O75817 140 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 MMP2P08253 660 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 MTHFD1P11586 935 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 BPIP17213 487 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 HNRNPH3P31942 346 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 RORAP35398 523 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 HADHAP40939 763 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 DMPKQ09013 629 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 PTCHD3Q3KNS1 767 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 CCDC183Q5T5S1 534 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 FAM198BQ6UWH4 519 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 IGFL3Q6UXB1 125 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 ZC3H18Q86VM9 953 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 LRRN4Q8WUT4 740 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 SRPK1Q96SB4 655 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 C17orf62Q9BQA9 187 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 DHRS4Q9BTZ2 278 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 IP6K2Q9UHH9 426 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 OSGIN2Q9Y236 505 aa17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 CFAP20Q9Y6A4 193 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-204ENST00000558394 DDX3YO15523 660 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 LDB2O43679 373 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 HBQ1P09105 142 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 CD48P09326 243 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 PBLDP30039 288 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 PREPP48147 710 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 ARCN1P48444 511 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 SLC25A11Q02978 314 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 ABRQ12979 859 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 KRT33BQ14525 404 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 LLGL1Q15334 1064 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 PCSK7Q16549 785 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 ZXDCQ2QGD7 858 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 ATP13A5Q4VNC0 1218 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 FBXO38Q6PIJ6 1188 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 MRGPREQ86SM8 312 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 BEND7Q8N7W2 519 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 KCTD6Q8NC69 237 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 BPIFA1Q9NP55 256 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 GPN3Q9UHW5 284 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 PCDHGA10Q9Y5H3 936 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 F8P00451 2351 aa17.35■□□□□ 0.37
TSPAN3-204ENST00000558394 SLC9B1P1A6NJY1 282 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 LCA5LO95447 670 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 CAPN1P07384 714 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 GJC1P36383 396 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 KPNA2P52292 529 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 NFE2L1Q14494 772 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 SSPNQ14714 243 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 DCAF10Q5QP82 559 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 MLIPQ5VWP3 458 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 ZNF571Q7Z3V5 609 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms