RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DUSP23Q9BVJ7 150 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 TMEM120AQ9BXJ8 343 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 POLR1EQ9GZS1 481 aaKnown RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 CLPBQ9H078 707 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 DCLRE1BQ9H816 532 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 SCUBE2Q9NQ36 999 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 SIRPGQ9P1W8 387 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 HEY2Q9UBP5 337 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 B4GALT6Q9UBX8 382 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 LRRC42Q9Y546 428 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 OR1A2Q9Y585 309 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 CSNK1G3Q9Y6M4 447 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 WDR91A4D1P6 747 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 KIF1CO43896 1103 aaKnown RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 DIAPH2O60879 1101 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 SOCS5O75159 536 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 RFPL1O75677 317 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 CBX6O95503 412 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 MMP2P08253 660 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 TPBGLP0DKB5 382 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 BGNP21810 368 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 CRHR1P34998 444 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 ADRA1AP35348 466 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 POLR2LP62875 67 aaKnown RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 NIPAL4Q0D2K0 466 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 IHHQ14623 411 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 NFATC4Q14934 902 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 PTPRRQ15256 657 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 ARMC3Q5W041 872 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 ZCCHC8Q6NZY4 707 aaKnown RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 KDELC1Q6UW63 502 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 MARK2Q7KZI7 788 aaKnown RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM1-212ENST00000558347 PELI3Q8N2H9 469 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 SPATA22Q8NHS9 363 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 PDCD6IPQ8WUM4 868 aaKnown RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 BTN2A2Q8WVV5 523 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 TSACCQ96A04 125 aaPredicted RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 SIGLEC10Q96LC7 697 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 KCNK13Q9HB14 408 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 ARNT2Q9HBZ2 717 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 CASS4Q9NQ75 786 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 SPASTQ9UBP0 616 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 DCTN4Q9UJW0 460 aa10.19□□□□□ -0.78
TPM1-212ENST00000558347 RALYQ9UKM9 306 aaKnown RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 COL27A1Q8IZC6 1860 aaPredicted RBP10.19□□□□□ -0.78
TPM1-212ENST00000558347 A0A0G2JND7 137 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 HGSO14964 777 aaPredicted RBP10.18□□□□□ -0.78
TPM1-212ENST00000558347 FZD6O60353 706 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 MT-CYBP00156 380 aaPredicted RBP10.18□□□□□ -0.78
TPM1-212ENST00000558347 LHCGRP22888 699 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 NPY2RP49146 381 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 HK3P52790 923 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 DSC2Q02487 901 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 ITKQ08881 620 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 MTM1Q13496 603 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 TCEA2Q15560 299 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 CNGA3Q16281 694 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 ALG11Q2TAA5 492 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 ENPP7Q6UWV6 458 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 RANBP10Q6VN20 620 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 UNC5AQ6ZN44 842 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 HID1Q8IV36 788 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 CTAGE3PQ8IX95 158 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 DCBLD1Q8N8Z6 715 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 IFI44Q8TCB0 444 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 FUBP1Q96AE4 644 aaKnown RBP10.18□□□□□ -0.78
TPM1-212ENST00000558347 MRGPRX2Q96LB1 330 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 TBATAQ96M53 351 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 COQ10AQ96MF6 247 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 SMIM14Q96QK8 99 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 SEMA3CQ99985 751 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 NAT9Q9BTE0 207 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 BOCQ9BWV1 1114 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 SLC13A1Q9BZW2 595 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 WWP1Q9H0M0 922 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 STN1Q9H668 368 aaKnown RBP10.18□□□□□ -0.78
TPM1-212ENST00000558347 PLAC1Q9HBJ0 212 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 DKK4Q9UBT3 224 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 CLCA2Q9UQC9 943 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
TPM1-212ENST00000558347 A0A0U1RQS6 177 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 A0A1W2PQ67 120 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 TMEM202A6NGA9 273 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 NPIPB15A6NHN6 443 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 SDR42E2A6NKP2 422 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 LMO7DNF2Z398 122 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 F5H423 210 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 TPP1O14773 563 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 YY2O15391 372 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 PGLSO95336 258 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 MT-CO3P00414 261 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 EPOP01588 193 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PDHA1P08559 390 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 HTR1BP28222 390 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 VIPR1P32241 457 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 GRIA1P42261 906 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms