RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 OLFM2O95897 454 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CD160O95971 181 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 GLUD1P00367 558 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 ENO2P09104 434 aaPredicted RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CBSLP0DN79 551 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 NCF1P14598 390 aaPredicted RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PFKLP17858 780 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 LAG3P18627 525 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 ATP6V1B2P21281 511 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 HMOX2P30519 316 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 GSTT1P30711 240 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CBSP35520 551 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CSKP41240 450 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CDKN1CP49918 316 aaPredicted RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 POLE2P56282 527 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 NME5P56597 212 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 EMX2Q04743 252 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PRKG2Q13237 762 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 APOFQ13790 326 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 GPR33Q49SQ1 333 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 MTX3Q5HYI7 312 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 SPOUT1Q5T280 376 aaKnown RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 MPP7Q5T2T1 576 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 C6orf52Q5T4I8 152 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 GRAMD4Q6IC98 578 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 KRT80Q6KB66 452 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PPP4R4Q6NUP7 873 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CNKSR3Q6P9H4 555 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 BORAQ6PGQ7 559 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CYP2R1Q6VVX0 501 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 ZBTB49Q6ZSB9 765 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 LYSMD3Q7Z3D4 306 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 ZFAND4Q86XD8 727 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CAMK1DQ8IU85 385 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 TCEAL8Q8IYN2 117 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PGBD3Q8N328 593 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 CBARPQ8N350 705 aaPredicted RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 AADATQ8N5Z0 425 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 DPP10Q8N608 796 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PAF1Q8N7H5 531 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 MFSD2AQ8NA29 543 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 FNDC5Q8NAU1 212 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 TNIP2Q8NFZ5 429 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 UBTD2Q8WUN7 234 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 NAT14Q8WUY8 206 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 EEF1AKMT1Q8WVE0 214 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 TMEM125Q96AQ2 219 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PPP3R2Q96LZ3 170 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 SH3GL3Q99963 347 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 VN1R3Q9BXE9 311 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 ATP13A3Q9H7F0 1226 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 COQ10BQ9H8M1 238 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 ZFYVE1Q9HBF4 777 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 BPIFA1Q9NP55 256 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 SARS2Q9NP81 518 aaKnown RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 DNMT3BQ9UBC3 853 aaKnown RBP7.17□□□□□ -1.26
VPS13C-206ENST00000558338 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 MAGEL2Q9UJ55 1249 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 IKZF3Q9UKT9 509 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 DMTF1Q9Y222 760 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 LZTS1Q9Y250 596 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 AP3M1Q9Y2T2 418 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PCDHA9Q9Y5H5 950 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 OR51B4Q9Y5P0 310 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 INSL5Q9Y5Q6 135 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 PTGDR2Q9Y5Y4 395 aa7.17□□□□□ -1.26
VPS13C-206ENST00000558338 SCN8AQ9UQD0 1980 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 TRBV5-4A0A0C4DH59 114 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 C2orf78A6NCI8 922 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 PPP6CO00743 305 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 ARPC2O15144 300 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 FFAR2O15552 330 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 HTRA2O43464 458 aaPredicted RBP7.16□□□□□ -1.26
VPS13C-206ENST00000558338 RGS14O43566 566 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 PQBP1O60828 265 aaKnown RBP7.16□□□□□ -1.26
VPS13C-206ENST00000558338 OR4F21O95013 312 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 TRBC1P01850 177 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 SLC6A2P23975 617 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 ACRV1P26436 265 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 HTR1EP28566 365 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 MZF1P28698 734 aaPredicted RBP7.16□□□□□ -1.26
VPS13C-206ENST00000558338 SERPINA4P29622 427 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 RFC2P35250 354 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 SPAM1P38567 509 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 ARL1P40616 181 aaPredicted RBP7.16□□□□□ -1.26
VPS13C-206ENST00000558338 AGTR2P50052 363 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 HK3P52790 923 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 NR1H2P55055 460 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 CDKL1Q00532 357 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 MYBPC1Q00872 1141 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 GUCA2AQ02747 115 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 GTF2H2Q13888 395 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 TCTN1Q2MV58 587 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 DEFB115Q30KQ5 88 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 MPPE1Q53F39 396 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 CDKL4Q5MAI5 379 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 C6orf136Q5SQH8 315 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 TMTC4Q5T4D3 741 aa7.16□□□□□ -1.26
VPS13C-206ENST00000558338 ZDHHC20Q5W0Z9 365 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms