RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SPRED3Q2MJR0 410 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 XKRXQ6PP77 449 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 FAM83AQ86UY5 434 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 TRPM4Q8TD43 1214 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 DCPSQ96C86 337 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 FBXL20Q96IG2 436 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 SLC39A1Q9NY26 324 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 LAMC3Q9Y6N6 1575 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 HDCP19113 662 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 ACSL1P33121 698 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 TKTL1P51854 596 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 INHBCP55103 352 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 CMC1Q7Z7K0 106 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 ADGRD2Q7Z7M1 963 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 C18orf25Q96B23 403 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 AGO4Q9HCK5 861 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 TMPRSS11EQ9UL52 423 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 SSH2Q76I76 1423 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MUSKO15146 869 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 FMO6PO60774 539 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 RGS19P49795 217 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 ANXA11P50995 505 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 CDK18Q07002 472 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 C9orf64Q5T6V5 341 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 RAB12Q6IQ22 244 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 GALNT11Q8NCW6 608 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 GMCL1P1Q8NEA9 526 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 CPNE2Q96FN4 548 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MED30Q96HR3 178 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 HDHD5Q9BXW7 423 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 REEP4Q9H6H4 257 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 FOLH1BQ9HBA9 442 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 THG1LQ9NWX6 298 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 TBC1D24Q9ULP9 559 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 ERCC6Q03468 1493 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 PRMT5O14744 637 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 TOXO94900 526 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 USP45Q70EL2 814 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MTSS1LQ765P7 747 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 DET1Q7L5Y6 550 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 CADM3Q8N126 398 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 USP7Q93009 1102 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MAB21L2Q9Y586 359 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 CABIN1Q9Y6J0 2220 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 GRIN2DO15399 1336 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 RTTNQ86VV8 2226 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MEN1O00255 615 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 KLF11O14901 512 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MBL2P11226 248 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 CFAP77Q6ZQR2 320 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 ABI1Q8IZP0 508 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 PIAS4Q8N2W9 510 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 UTP4Q969X6 686 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 QRFPRQ96P65 431 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 GAL3ST1Q99999 423 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 KLHL28Q9NXS3 571 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 ABCB7O75027 752 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 TFP02787 698 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 NR2F6P10588 404 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MAPTP10636 758 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 DARSP14868 501 aaKnown RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 OR3A2P47893 321 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 VMACQ2NL98 169 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 INO80DQ53TQ3 878 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 AKR1C8PQ5T2L2 129 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 FAM84AQ96KN4 292 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 SLA2Q9H6Q3 261 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.65□□□□□ -1.83
ATXN3-248ENST00000558190 FAM50BQ9Y247 325 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 SPAG17Q6Q759 2223 aa3.65□□□□□ -1.83
ATXN3-248ENST00000558190 MSH6P52701 1360 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ABCB11O95342 1321 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 AQP9O43315 295 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ENTPD6O75354 484 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SLC25A14O95258 325 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CD6P30203 668 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SOAT1P35610 550 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 AQP2P41181 271 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SSTP61278 116 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TMEM17Q86X19 198 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ARMC10Q8N2F6 343 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 UBR7Q8N806 425 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FARSAQ9Y285 508 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TLR6Q9Y2C9 796 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 DCST1Q5T197 706 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 HSDL2Q6YN16 418 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 C12orf45Q8N5I9 185 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 IL22Q9GZX6 179 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 MKRN2Q9H000 416 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 B3GNT3Q9Y2A9 372 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FAM135BQ49AJ0 1406 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CBY3A6NI87 242 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 DISC1C4P0D8 188 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 M0R233 179 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PRKCAP17252 672 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 AFF1P51825 1210 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 LIPMQ5VYY2 423 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SPATC1Q76KD6 591 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GPR180Q86V85 440 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms