RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 AP3B1O00203 1094 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 QSOX1O00391 747 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 FTCDO95954 541 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 SLC5A2P31639 672 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 ADRA1AP35348 466 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CHRNA4P43681 627 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CXADRP78310 365 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
LINC00648-204ENST00000557749 NFATC2Q13469 925 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 RPS6KA1Q15418 735 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 GPRC6AQ5T6X5 926 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 XKR5Q6UX68 686 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 FAM151BQ6UXP7 276 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 USP53Q70EK8 1073 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 KLHDC8BQ8IXV7 354 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 ALDH16A1Q8IZ83 802 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 TRIM58Q8NG06 486 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CCDC110Q8TBZ0 833 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 ZNF398Q8TD17 642 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 SNRNP27Q8WVK2 155 aaKnown RBP11.22□□□□□ -0.61
LINC00648-204ENST00000557749 ZFPM2Q8WW38 1151 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 PATE1Q8WXA2 126 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CCDC74BQ96LY2 380 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
LINC00648-204ENST00000557749 TTC1Q99614 292 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 NUDT22Q9BRQ3 303 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 BPIFA1Q9NP55 256 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 HOMER3Q9NSC5 361 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 CRLS1Q9UJA2 301 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 ACSL5Q9ULC5 683 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 GUCA1BQ9UMX6 200 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 PRKAB1Q9Y478 270 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 ST14Q9Y5Y6 855 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 SLC30A1Q9Y6M5 507 aa11.22□□□□□ -0.61
LINC00648-204ENST00000557749 PTPRQQ9UMZ3 2332 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 CFAP47Q6ZTR5 3102 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 ZZEF1O43149 2961 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 E7EVH7 732 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 AURKAO14965 403 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 DDX3YO15523 660 aaKnown RBP11.21□□□□□ -0.61
LINC00648-204ENST00000557749 SRP72O76094 671 aaKnown RBP11.21□□□□□ -0.61
LINC00648-204ENST00000557749 AGTP01019 485 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 ANKRD34CP0C6C1 535 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 AMD1P17707 334 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 ITPKBP27987 946 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 NDUFS1P28331 727 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 FDFT1P37268 417 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 MAPK10P53779 464 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 UBE2IP63279 158 aaKnown RBP11.21□□□□□ -0.61
LINC00648-204ENST00000557749 CHRNA6Q15825 494 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 DCAF12Q5T6F0 453 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 TMEM26Q6ZUK4 368 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 SNX20Q7Z614 316 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 FAM71DQ8N9W8 422 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 OR4K2Q8NGD2 314 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 SLC35B2Q8TB61 432 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 RTP4Q96DX8 246 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 ZDHHC12Q96GR4 267 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 NAF1Q96HR8 494 aaKnown RBP11.21□□□□□ -0.61
LINC00648-204ENST00000557749 EFHD1Q9BUP0 239 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 SEMA6CQ9H3T2 930 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 ASB8Q9H765 288 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 PRDM8Q9NQV8 689 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 PLEKHM1Q9Y4G2 1056 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 HEBP2Q9Y5Z4 205 aa11.21□□□□□ -0.61
LINC00648-204ENST00000557749 SCN8AQ9UQD0 1980 aa11.21□□□□□ -0.62
LINC00648-204ENST00000557749 MN1Q10571 1320 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 MGAT4DA6NG13 374 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 H7C0S8 307 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 AP2A1O95782 977 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 LORP23490 312 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 PPARGP37231 505 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 LMAN1P49257 510 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 C16orf72Q14CZ0 275 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 SKIDA1Q1XH10 827 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 PLA2G4EQ3MJ16 856 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 BCL7AQ4VC05 210 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 MANEAQ5SRI9 462 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 CEACAM20Q6UY09 585 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 NLRP9Q7RTR0 991 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 FAM129CQ86XR2 697 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 ZNF547Q8IVP9 402 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 SFTPA2Q8IWL1 248 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 NCSTNQ92542 709 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 PEX13Q92968 403 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 USP7Q93009 1102 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 COPS8Q99627 209 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 CCM2Q9BSQ5 444 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 RAB33BQ9H082 229 aa11.2□□□□□ -0.62
LINC00648-204ENST00000557749 TRIT1Q9H3H1 467 aaKnown RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 PACSIN2Q9UNF0 486 aaPredicted RBP11.2□□□□□ -0.62
LINC00648-204ENST00000557749 DNAJC16Q9Y2G8 782 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms