RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PDE7BQ9NP56 450 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 FAM8A1Q9UBU6 413 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 AAR2Q9Y312 384 aaKnown RBP14.33□□□□□ -0.12
SHMT2-235ENST00000557740 BOD1L1Q8NFC6 3051 aa14.33□□□□□ -0.12
SHMT2-235ENST00000557740 CCDC66A2RUB6 948 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 KLHL33A6NCF5 533 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 C5orf60A6NFR6 353 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 MGAT4DA6NG13 374 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 TERTO14746 1132 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 KCNN4O15554 427 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 SLC35G4P0C7Q5 338 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 RBP3P10745 1247 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 MTHFD1P11586 935 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 NELFEP18615 380 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PSMB4P28070 264 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 OAS2P29728 719 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 CA5AP35218 305 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PTPN7P35236 360 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 DLSTP36957 453 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 ARL4DP49703 201 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PPP1CAP62136 330 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PDE1BQ01064 536 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 TUBB3Q13509 450 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 SEPT6Q14141 434 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PTPRCAPQ14761 206 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 DEFB109BQ30KR1 87 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 DNTTIP2Q5QJE6 756 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 ANKRD20A2Q5SQ80 823 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 ANKRD20A1Q5TYW2 823 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 ANKRD20A3Q5VUR7 823 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 DARS2Q6PI48 645 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 BEND7Q8N7W2 519 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 SIDT2Q8NBJ9 832 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 OR4K2Q8NGD2 314 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 APOBEC4Q8WW27 367 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 ULK4Q96C45 1275 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 LRRC45Q96CN5 670 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 DCUN1D1Q96GG9 259 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 SPATA13Q96N96 652 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PPP1R2P1Q96PQ5 205 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PANX2Q96RD6 677 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 OSBPL8Q9BZF1 889 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 ASB8Q9H765 288 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 FKBPLQ9UIM3 349 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 CRLS1Q9UJA2 301 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 CROTQ9UKG9 612 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 EFR3BQ9Y2G0 817 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PCDHB3Q9Y5E6 796 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 PCDHA3Q9Y5H8 950 aa14.32□□□□□ -0.12
SHMT2-235ENST00000557740 MRPS18BQ9Y676 258 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 CFAP20Q9Y6A4 193 aaKnown RBP14.32□□□□□ -0.12
SHMT2-235ENST00000557740 SPAG6O75602 509 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 ZNF189O75820 626 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-235ENST00000557740 SRP72O76094 671 aaKnown RBP14.31□□□□□ -0.12
SHMT2-235ENST00000557740 CRTAMO95727 393 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 MT-ND3P03897 115 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
SHMT2-235ENST00000557740 CCNYL3P0C7X3 344 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 PYGMP11217 842 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 RALBP11234 206 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 FGF5P12034 268 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 ADRA1AP35348 466 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 RWDD2BP57060 319 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 CRTC2Q53ET0 693 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-235ENST00000557740 ATP1A1-AS1Q5TC04 95 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 ARMC6Q6NXE6 501 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 PTRH1Q86Y79 214 aaKnown RBP14.31□□□□□ -0.12
SHMT2-235ENST00000557740 TMTC1Q8IUR5 882 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 SLC41A2Q96JW4 573 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 C12orf66Q96MD2 445 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 CD180Q99467 661 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 FAM118BQ9BPY3 351 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 WWP1Q9H0M0 922 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 KCND3Q9UK17 655 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 RARRES3Q9UL19 164 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 ACSL5Q9ULC5 683 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 KCTD3Q9Y597 815 aa14.31□□□□□ -0.12
SHMT2-235ENST00000557740 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-235ENST00000557740 IGHV5-51A0A0C4DH38 117 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 UBA6A0AVT1 1052 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-235ENST00000557740 RCCD1A6NED2 376 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 OR5K3A6NET4 321 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 TLCD2A6NGC4 264 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 CFAP99D6REC4 459 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 KATNA1O75449 491 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 TJP3O95049 919 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 ITGALP20701 1170 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 ACY1Q03154 408 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 OLIG2Q13516 323 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 KRT33BQ14525 404 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 GSE1Q14687 1217 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 BCL7AQ4VC05 210 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 METRNLQ641Q3 311 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 DUS1LQ6P1R4 473 aaKnown RBP14.3□□□□□ -0.12
SHMT2-235ENST00000557740 RANBP10Q6VN20 620 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 KMT5CQ86Y97 462 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 OR2L2Q8NH16 312 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms