RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PTK6Q13882 451 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 SEPT6Q14141 434 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 KCNJ11Q14654 390 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 PPP1R7Q15435 360 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 SKIDA1Q1XH10 827 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 PYCR3Q53H96 274 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 ANKS6Q68DC2 871 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 GLT6D1Q7Z4J2 308 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 LINC00523Q86TU6 105 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 GALNT13Q8IUC8 556 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 SFRP1Q8N474 314 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 SPATA4Q8NEY3 305 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 APOBEC4Q8WW27 367 aaKnown RBP16.37■□□□□ 0.21
NEK9-211ENST00000557673 GPR63Q9BZJ6 419 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 FBXO8Q9NRD0 319 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 PRKAB1Q9Y478 270 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 PCYT1BQ9Y5K3 369 aaPredicted RBP16.37■□□□□ 0.21
NEK9-211ENST00000557673 MRFAP1Q9Y605 127 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 ZFC3H1O60293 1989 aaKnown RBP16.37■□□□□ 0.21
NEK9-211ENST00000557673 LRRK2Q5S007 2527 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 RGSL1A5PLK6 1076 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 SLC2A4P14672 509 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 TPSB2P20231 275 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 LMAN1P49257 510 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 DCDC1P59894 354 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 DR1Q01658 176 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 ABHD18Q0P651 414 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 MSLNQ13421 630 aaPredicted RBP16.36■□□□□ 0.21
NEK9-211ENST00000557673 TPSAB1Q15661 275 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 WHAMMP3Q1A5X7 153 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 TMC3Q7Z5M5 1100 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 BMPERQ8N8U9 685 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 GPR26Q8NDV2 337 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 KIF18AQ8NI77 898 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 TMEM9Q9P0T7 183 aa16.36■□□□□ 0.21
NEK9-211ENST00000557673 NKX2-8O15522 239 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 DNAJC6O75061 913 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 TMEM63AO94886 807 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 HMGCLP35914 325 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 GRIA1P42261 906 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 HHEXQ03014 270 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 CDC20Q12834 499 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 CDH17Q12864 832 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 DHX34Q14147 1143 aaKnown RBP16.35■□□□□ 0.21
NEK9-211ENST00000557673 CRTC2Q53ET0 693 aaPredicted RBP16.35■□□□□ 0.21
NEK9-211ENST00000557673 SNAP47Q5SQN1 464 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 PPP1R21Q6ZMI0 780 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 SYDE1Q6ZW31 735 aaPredicted RBP16.35■□□□□ 0.21
NEK9-211ENST00000557673 ZNF534Q76KX8 674 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 ARHGAP22Q7Z5H3 698 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 AVL9Q8NBF6 648 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 OR52K1Q8NGK4 314 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 SLC37A2Q8TED4 501 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 NCSTNQ92542 709 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 KRT12Q99456 494 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 SPATA16Q9BXB7 569 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.35■□□□□ 0.21
NEK9-211ENST00000557673 SPRY4Q9C004 299 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 EPB41L1Q9H4G0 881 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 ARFGAP3Q9NP61 516 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 SARS2Q9NP81 518 aaKnown RBP16.35■□□□□ 0.21
NEK9-211ENST00000557673 CASS4Q9NQ75 786 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 PIH1D1Q9NWS0 290 aaKnown RBP16.35■□□□□ 0.21
NEK9-211ENST00000557673 VPS18Q9P253 973 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 ZNHIT2Q9UHR6 403 aa16.35■□□□□ 0.21
NEK9-211ENST00000557673 TRBV23OR9-2A0A075B6M9 112 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 TCRBV7S3A2A0A539 114 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 A8MU76 341 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 TTI1O43156 1089 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 PRKAR1AP10644 381 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 GP1BBP13224 206 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 BPIP17213 487 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 ZNF140P52738 457 aaPredicted RBP16.34■□□□□ 0.21
NEK9-211ENST00000557673 EPHA4P54764 986 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 CDK16Q00536 496 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 TAF1AQ15573 450 aaPredicted RBP16.34■□□□□ 0.21
NEK9-211ENST00000557673 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.34■□□□□ 0.21
NEK9-211ENST00000557673 ZNF648Q5T619 568 aaPredicted RBP16.34■□□□□ 0.21
NEK9-211ENST00000557673 ANKRD22Q5VYY1 191 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 SLC9B2Q86UD5 537 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 LURAP1LQ8IV03 231 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 BRSK1Q8TDC3 778 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 CPT1BQ92523 772 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 TRIM51Q9BSJ1 452 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 ZNF71Q9NQZ8 489 aaPredicted RBP16.34■□□□□ 0.21
NEK9-211ENST00000557673 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.34■□□□□ 0.21
NEK9-211ENST00000557673 TMEM184BQ9Y519 407 aaPredicted RBP16.34■□□□□ 0.21
NEK9-211ENST00000557673 ARL5AQ9Y689 179 aa16.34■□□□□ 0.21
NEK9-211ENST00000557673 NBASA2RRP1 2371 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 LOC101059948A0A1B0GTJ6 334 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 POLR1CO15160 346 aaPredicted RBP16.33■□□□□ 0.2
NEK9-211ENST00000557673 STK17BO94768 372 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 EML2O95834 649 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 TCN2P20062 427 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 TUBB2AQ13885 445 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 POU6F1Q14863 301 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 IGFBP7Q16270 282 aa16.33■□□□□ 0.2
NEK9-211ENST00000557673 LACTB2Q53H82 288 aaPredicted RBP16.33■□□□□ 0.2
NEK9-211ENST00000557673 CHST15Q7LFX5 561 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms