RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PYCARD-AS1I3L0S3 204 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 KIF1CO43896 1103 aaKnown RBP13.87□□□□□ -0.19
SNX6-210ENST00000557341 ZNF189O75820 626 aaPredicted RBP13.87□□□□□ -0.19
SNX6-210ENST00000557341 SRP72O76094 671 aaKnown RBP13.87□□□□□ -0.19
SNX6-210ENST00000557341 TJP3O95049 919 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 CRTAMO95727 393 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 MTHFD1P11586 935 aaKnown RBP13.87□□□□□ -0.19
SNX6-210ENST00000557341 ADRA1AP35348 466 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 RWDD2BP57060 319 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 PDE1BQ01064 536 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 PTPRCAPQ14761 206 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 RPE65Q16518 533 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 CRTC2Q53ET0 693 aaPredicted RBP13.87□□□□□ -0.19
SNX6-210ENST00000557341 DARS2Q6PI48 645 aaKnown RBP13.87□□□□□ -0.19
SNX6-210ENST00000557341 RANBP10Q6VN20 620 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 ATG14Q6ZNE5 492 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 DET1Q7L5Y6 550 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 OR4K2Q8NGD2 314 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 KLHL6Q8WZ60 621 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 LRRC45Q96CN5 670 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 STAMBPL1Q96FJ0 436 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 SPATA13Q96N96 652 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 APOL2Q9BQE5 337 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 CLMPQ9H6B4 373 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 ASB8Q9H765 288 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 IL17BQ9UHF5 180 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 FKBPLQ9UIM3 349 aa13.87□□□□□ -0.19
SNX6-210ENST00000557341 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 NKX2-8O15522 239 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 SUV39H1O43463 412 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 KIAA0754O94854 1291 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 WISP1O95388 367 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 SLC35G4P0C7Q5 338 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 FGF5P12034 268 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 ZNF28P17035 718 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 NELFEP18615 380 aaKnown RBP13.86□□□□□ -0.19
SNX6-210ENST00000557341 TCN2P20062 427 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 OAS2P29728 719 aaKnown RBP13.86□□□□□ -0.19
SNX6-210ENST00000557341 ZNF75DP51815 510 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 PPP1CAP62136 330 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 BCL7AQ4VC05 210 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 METRNLQ641Q3 311 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 C6orf15Q6UXA7 325 aaPredicted RBP13.86□□□□□ -0.19
SNX6-210ENST00000557341 PPP1R3BQ86XI6 285 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
SNX6-210ENST00000557341 OR2L2Q8NH16 312 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 CCDC110Q8TBZ0 833 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 UBXN4Q92575 508 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 ELMO2Q96JJ3 720 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 C12orf66Q96MD2 445 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 CD180Q99467 661 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 FAM118BQ9BPY3 351 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 TRIM4Q9C037 500 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 LNPEPQ9UIQ6 1025 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 CRLS1Q9UJA2 301 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 CFAP20Q9Y6A4 193 aaKnown RBP13.86□□□□□ -0.19
SNX6-210ENST00000557341 DUSP10Q9Y6W6 482 aa13.86□□□□□ -0.19
SNX6-210ENST00000557341 SNRNP200O75643 2136 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 TLCD2A6NGC4 264 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 TERTO14746 1132 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 MT-ND3P03897 115 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 PYGMP11217 842 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 RALBP11234 206 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 DLSTP36957 453 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 HADHAP40939 763 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 VAV2P52735 878 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 ZNF140P52738 457 aaPredicted RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 KCNC4Q03721 635 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 TUBB3Q13509 450 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 OLIG2Q13516 323 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNX6-210ENST00000557341 DNTTIP2Q5QJE6 756 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 DUS1LQ6P1R4 473 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 OOSP2Q86WS3 158 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 KMT5CQ86Y97 462 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 SIDT2Q8NBJ9 832 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 GALNT6Q8NCL4 622 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 OR13C4Q8NGS5 318 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 ALG3Q92685 438 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 ULK4Q96C45 1275 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 RNF31Q96EP0 1072 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 SLC41A2Q96JW4 573 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 C19orf43Q9BQ61 176 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 TBL1YQ9BQ87 522 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 WWP1Q9H0M0 922 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 PDE7BQ9NP56 450 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 SEMA5BQ9P283 1151 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 FAM8A1Q9UBU6 413 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 FEZ2Q9UHY8 353 aaPredicted RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 CROTQ9UKG9 612 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 ACSL5Q9ULC5 683 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 REXO2Q9Y3B8 237 aaKnown RBP13.85□□□□□ -0.19
SNX6-210ENST00000557341 PCDHB3Q9Y5E6 796 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 FLNCQ14315 2725 aa13.85□□□□□ -0.19
SNX6-210ENST00000557341 TNRC6AQ8NDV7 1962 aaKnown RBP13.84□□□□□ -0.19
SNX6-210ENST00000557341 IGHV5-51A0A0C4DH38 117 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 GRID2IPA4D2P6 1211 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms