RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PLCL1Q15111 1095 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 KYNUQ16719 465 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 LYPLAL1Q5VWZ2 237 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 HGSNATQ68CP4 663 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 NCBP2-AS2Q69YL0 99 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 KLHL35Q6PF15 583 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 MRGPREQ86SM8 312 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 SYTL1Q8IYJ3 562 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 GALNT16Q8N428 558 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 ENOX1Q8TC92 643 aaKnown RBP12.22□□□□□ -0.45
PSEN1-221ENST00000557293 TEKT4Q8WW24 435 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 ZNF653Q96CK0 615 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 LURAP1Q96LR2 239 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 INSM2Q96T92 566 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-221ENST00000557293 TLR10Q9BXR5 811 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 ILKAPQ9H0C8 392 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-221ENST00000557293 CLSTN2Q9H4D0 955 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 MAGEE1Q9HCI5 957 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 ITPR3Q14573 2671 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 CELSR1Q9NYQ6 3014 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 OR6C74A6NCV1 312 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 AURKAO14965 403 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 KCNJ13O60928 360 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 CNOT3O75175 753 aaKnown RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 STSP08842 583 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 OTX2P32243 289 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 CD86P42081 329 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ARCN1P48444 511 aaKnown RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 CTSCP53634 463 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 PER3P56645 1201 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 SLC25A11Q02978 314 aaKnown RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 GALNT3Q14435 633 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 BECN1Q14457 450 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 SSPNQ14714 243 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 TESK1Q15569 626 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ZXDCQ2QGD7 858 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ATP13A5Q4VNC0 1218 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ATP13A4Q4VNC1 1196 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 FKBP15Q5T1M5 1219 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 TMTC4Q5T4D3 741 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 APTXQ7Z2E3 356 aaKnown RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 TTC30BQ8N4P2 665 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 GRHL3Q8TE85 626 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 VPS35Q96QK1 796 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ERGIC2Q96RQ1 377 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-221ENST00000557293 FANCLQ9NW38 375 aa12.21□□□□□ -0.45
PSEN1-221ENST00000557293 NF1P21359 2839 aa12.21□□□□□ -0.46
PSEN1-221ENST00000557293 HEATR9A2RTY3 570 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 LRRC10BA6NIK2 292 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.467e-8■■□□□ 12.8
PSEN1-221ENST00000557293 MTHFD1P11586 935 aaKnown RBP12.2□□□□□ -0.46
PSEN1-221ENST00000557293 GZMAP12544 262 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 CA4P22748 312 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 HALP42357 657 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 FOXL2P58012 376 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 UBE2HP62256 183 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 IFI16Q16666 785 aaKnown RBP12.2□□□□□ -0.46
PSEN1-221ENST00000557293 METRNLQ641Q3 311 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 ZNF571Q7Z3V5 609 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-221ENST00000557293 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 RAB43Q86YS6 212 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 TRAPPC5Q8IUR0 188 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 CARFQ8N187 725 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 RASGEF1AQ8N9B8 481 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 FAR1Q8WVX9 515 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 RELTQ969Z4 430 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 TADA1Q96BN2 335 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 NRTNQ99748 197 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 AGPAT4Q9NRZ5 378 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 RAD18Q9NS91 495 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 SLC24A2Q9UI40 661 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 ZNF711Q9Y462 761 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 SPO11Q9Y5K1 396 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
PSEN1-221ENST00000557293 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
PSEN1-221ENST00000557293 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 TMEM150CB9EJG8 249 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 H3BMH7 237 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 LDB2O43679 373 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 CBSLP0DN79 551 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 EDN3P14138 238 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 VCLP18206 1134 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 POLR2CP19387 275 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-221ENST00000557293 CBSP35520 551 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 HADHAP40939 763 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 ZBTB17Q13105 803 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 ART3Q13508 389 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 HIF1AQ16665 826 aa12.19□□□□□ -0.46
PSEN1-221ENST00000557293 CCDC183Q5T5S1 534 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms