RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 Q6ZPB1 254 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 CENPQQ7L2Z9 268 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 SYT9Q86SS6 491 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 CAMK1DQ8IU85 385 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 SUN3Q8TAQ9 357 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 THAP3Q8WTV1 239 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 SHC3Q92529 594 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 ZNF501Q96CX3 271 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 COX4I2Q96KJ9 171 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 CD180Q99467 661 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 ZSWIM1Q9BR11 485 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 CLEC4MQ9H2X3 399 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 KCTD10Q9H3F6 313 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 LIME1Q9H400 295 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 RMI1Q9H9A7 625 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 ACTR5Q9H9F9 607 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 MAGEF1Q9HAY2 307 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 SYTL2Q9HCH5 934 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 PCMTD2Q9NV79 361 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 ZNF212Q9UDV6 495 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 SERTAD3Q9UJW9 196 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 STAP1Q9ULZ2 295 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 TRAF3IP3Q9Y228 551 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 KCNK6Q9Y257 313 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 ZNF835Q9Y2P0 537 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 PTRH2Q9Y3E5 179 aaKnown RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 SNX10Q9Y5X0 201 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 MYO7BQ6PIF6 2116 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 MYH11P35749 1972 aa5.6□□□□□ -1.51
ATXN3-245ENST00000556958 TNRC6AQ8NDV7 1962 aaKnown RBP5.6□□□□□ -1.51
ATXN3-245ENST00000556958 FAM237BA0A1B0GVD1 139 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 TRIM49BA6NDI0 452 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 PSMD11O00231 422 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 SOCS6O14544 535 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 EIF1AYO14602 144 aaKnown RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 GRAP2O75791 330 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 ZRANB2O95218 330 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 ZBTB11O95625 1053 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 GM2AP17900 193 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 CYP2A7P20853 494 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 CES1P23141 567 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 NR2F2P24468 414 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 MST1P26927 711 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 CSNK1DP48730 415 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 CLCNKAP51800 687 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 NKX6-1P78426 367 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 CEBPZQ03701 1054 aaKnown RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 SYCP1Q15431 976 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 NFIL3Q16649 462 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 DENND2CQ68D51 928 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 TMEM211Q6ICI0 200 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 RWDD4Q6NW29 188 aaKnown RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 NAPRTQ6XQN6 538 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 LINC00696Q6ZRV3 163 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 C11orf57Q6ZUT1 292 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 B4GALNT4Q76KP1 1039 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 CARFQ8N187 725 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 AOPEPQ8N6M6 819 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 KIAA0895Q8NCT3 520 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 C3orf20Q8ND61 904 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 OR2Y1Q8NGV0 311 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 LILRB4Q8NHJ6 448 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 EXD1Q8NHP7 514 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 RSC1A1Q92681 617 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 HAS2Q92819 552 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 ALKBH8Q96BT7 664 aaKnown RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 PGAP3Q96FM1 320 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 DTD2Q96FN9 168 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 INTS4Q96HW7 963 aaKnown RBP5.59□□□□□ -1.51
ATXN3-245ENST00000556958 MAP3K3Q99759 626 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 RNF32Q9H0A6 362 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 PLCB1Q9NQ66 1216 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 RASSF1Q9NS23 344 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 PIGVQ9NUD9 493 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 POT1Q9NUX5 634 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 GPATCH2LQ9NWQ4 482 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 VPS18Q9P253 973 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 B4GALT6Q9UBX8 382 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 NDOR1Q9UHB4 597 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 DNAI1Q9UI46 699 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 RNF112Q9ULX5 631 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 PPT2Q9UMR5 302 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 COQ4Q9Y3A0 265 aa5.59□□□□□ -1.51
ATXN3-245ENST00000556958 C17orf113A0A1B0GUU1 675 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 CCDC66A2RUB6 948 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 PRRG2O14669 202 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 SPRY1O43609 319 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-245ENST00000556958 HEXIM1O94992 359 aaKnown RBP5.58□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF202O95125 648 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 TSPAN12O95859 305 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 CYP2A6P11509 494 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-245ENST00000556958 ACP5P13686 325 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 ABOP16442 354 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 MMP11P24347 488 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 CHRNB4P30926 498 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 VIPR1P32241 457 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 ETV3P41162 512 aa5.58□□□□□ -1.52
ATXN3-245ENST00000556958 TNFSF10P50591 281 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms