RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MSH3P20585 1137 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 PBLDP30039 288 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 MC4RP32245 332 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 HADHAP40939 763 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 TSPAN7P41732 249 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 CAPZBP47756 277 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 PRLHRP49683 370 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 VAC14Q08AM6 782 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 SEMA5AQ13591 1074 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 TUBB2AQ13885 445 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 POU6F1Q14863 301 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 RPE65Q16518 533 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 LONRF2Q1L5Z9 754 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 SNAP47Q5SQN1 464 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 FNBP1LQ5T0N5 605 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ARHGAP40Q5TG30 622 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 DUS1LQ6P1R4 473 aaKnown RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 INO80CQ6PI98 192 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 SNX20Q7Z614 316 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ZFAND4Q86XD8 727 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 TRIM48Q8IWZ4 208 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 RBM12BQ8IXT5 1001 aaKnown RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 PIANPQ8IYJ0 282 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 LILRA3Q8N6C8 439 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 OR2L2Q8NH16 312 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 NCSTNQ92542 709 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ART4Q93070 314 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ULK4Q96C45 1275 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 SGF29Q96ES7 293 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF514Q96K75 400 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 PBKQ96KB5 322 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 RMDN2Q96LZ7 410 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 TUBB2BQ9BVA1 445 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 DDA1Q9BW61 102 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 FAM96AQ9H5X1 160 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 AKAP7Q9P0M2 348 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-224ENST00000556737 CRLS1Q9UJA2 301 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 CDC23Q9UJX2 597 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 PSMD13Q9UNM6 376 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 MRFAP1Q9Y605 127 aa10.12□□□□□ -0.79
SHMT2-224ENST00000556737 MGAT4DA6NG13 374 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 A8MU76 341 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ATXN7O15265 892 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 UBXN7O94888 489 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 MTHFD1P11586 935 aaKnown RBP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ETS1P14921 441 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 TYRP1P17643 537 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 WT1P19544 449 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ITGALP20701 1170 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ACRV1P26436 265 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CD82P27701 267 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CSTF2P33240 577 aaKnown RBP eCLIP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 GRIA1P42261 906 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 HALP42357 657 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 LEPRP48357 1165 aaKnown RBP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 PPP1CAP62136 330 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 SNX1Q13596 522 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 SEPT6Q14141 434 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 WHAMMP3Q1A5X7 153 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 METRNLQ641Q3 311 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ANKS6Q68DC2 871 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 FAM129CQ86XR2 697 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CEP112Q8N8E3 955 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 OR52K1Q8NGK4 314 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 OR13J1Q8NGT2 312 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 HM13Q8TCT9 377 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 COG1Q8WTW3 980 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 JPH3Q8WXH2 748 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 TTC9Q92623 222 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 LRRC45Q96CN5 670 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CXorf40BQ96DE9 158 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 C9orf72Q96LT7 481 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CCNL2Q96S94 520 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-224ENST00000556737 COPS8Q99627 209 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 WWP1Q9H0M0 922 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ETNK1Q9HBU6 452 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 ZDHHC3Q9NYG2 299 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 KLHL3Q9UH77 587 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 B3GALT1Q9Y5Z6 326 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
SHMT2-224ENST00000556737 CCDC78A2IDD5 438 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 OR51F1A6NGY5 319 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 ERI2A8K979 691 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 STMND1H3BQB6 276 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 PGRMC1O00264 195 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 PSMD3O43242 534 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 C1QL1O75973 258 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 SLU7O95391 586 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 IFNB1P01574 187 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 ZSCAN5DPP0CG00 497 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 STIP1P31948 543 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 FOXN2P32314 431 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 RPL22P35268 128 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 FDFT1P37268 417 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 RAB15P59190 212 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 MC2RQ01718 297 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 CDH17Q12864 832 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms