RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PPHLN1Q8NEY8 458 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 OR4D9Q8NGE8 314 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ACTRT1Q8TDG2 376 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 COG1Q8WTW3 980 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 FGF11Q92914 225 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 MAGOHBQ96A72 148 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 PRR11Q96HE9 360 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 AHCYL2Q96HN2 611 aaKnown RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 LINC00615Q96LM1 132 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 SLC46A1Q96NT5 459 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 AP1M1Q9BXS5 423 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ZMYND15Q9H091 742 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 FAM96AQ9H5X1 160 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-205ENST00000556310 TCAF1Q9Y4C2 921 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
SLIRP-205ENST00000556310 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC78A2IDD5 438 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 MGAT4DA6NG13 374 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 HGSO14964 777 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 PHF2O75151 1096 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 THRAP10827 490 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 TCP1P17987 556 aaKnown RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 FOXN2P32314 431 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 EIF2S3P41091 472 aaKnown RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 SLC19A1P41440 591 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 MAGEA6P43360 314 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CDKN1CP49918 316 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 LIMK2P53671 638 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 ITIH4Q14624 930 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 DBN1Q16643 649 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 NKAIN2Q5VXU1 208 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 WDR74Q6RFH5 385 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 AFTPHQ6ULP2 937 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF574Q6ZN55 896 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 TMEM26Q6ZUK4 368 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CLEC14AQ86T13 490 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 BEND7Q8N7W2 519 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 OR2L2Q8NH16 312 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 HM13Q8TCT9 377 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CMKLR1Q99788 373 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-205ENST00000556310 PYCARDQ9ULZ3 195 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 WDR37Q9Y2I8 494 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 AHCTF1Q8WYP5 2266 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 PTPRQQ9UMZ3 2332 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 NBEAQ8NFP9 2946 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 OR51F1A6NGY5 319 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 TNFSF15O95150 251 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 KRT14P02533 472 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 JMJD7P0C870 316 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PRSS56P0CW18 603 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 HGFP14210 728 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 COILP38432 576 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 FNTAP49354 379 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PPM1FP49593 454 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 VPS41P49754 854 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 SESN2P58004 480 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 CFHR1Q03591 330 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 GPS1Q13098 491 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 KCNJ11Q14654 390 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 CLCA4Q14CN2 919 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 TRIP13Q15645 432 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PCID2Q5JVF3 399 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 TMEM71Q6P5X7 295 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 XKR5Q6UX68 686 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PACS1Q6VY07 963 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 MICALCLQ6ZW33 695 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF534Q76KX8 674 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF248Q8NDW4 579 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 NAT14Q8WUY8 206 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 HDAC10Q969S8 669 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF778Q96MU6 729 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 TBC1D10AQ9BXI6 508 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms