RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 FAM102AQ5T9C2 384 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-236ENST00000556220 RAET1GQ6H3X3 334 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 TRNP1Q6NT89 227 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 DOK6Q6PKX4 331 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 PHLDB2Q86SQ0 1253 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 SRLQ86TD4 932 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 SPPL2CQ8IUH8 684 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 ARFGAP1Q8N6T3 406 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 ADAMTS17Q8TE56 1095 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 UBE2Q2Q8WVN8 375 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 C18orf8Q96DM3 657 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 TBC1D31Q96DN5 1066 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 CFAP57Q96MR6 1250 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 FCRL4Q96PJ5 515 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 ASPNQ9BXN1 380 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 RNF32Q9H0A6 362 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 UBA2Q9UBT2 640 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-236ENST00000556220 B4GALT6Q9UBX8 382 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 TBC1D29Q9UFV1 150 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 OSGIN2Q9Y236 505 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 TMEM98Q9Y2Y6 226 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 ACANP16112 2415 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 FAM237AA0A1B0GTK4 181 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 TRIM49BA6NDI0 452 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 GOLGA6CA6NDK9 693 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 GOLGA6BA6NDN3 693 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 LILRA5A6NI73 299 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 TRAFD1O14545 582 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-236ENST00000556220 PF4P02776 101 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 GOLGA6DP0CG33 693 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 BPIP17213 487 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 TYRP1P17643 537 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 TRHRP34981 398 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-236ENST00000556220 KRT9P35527 623 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 RGRP47804 291 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 GLRBP48167 497 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 NDUFA8P51970 172 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 HDAC4P56524 1084 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 DPTQ07507 201 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 BCL2L1Q07817 233 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 CNGA3Q16281 694 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 PARP15Q460N3 678 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 CCDC40Q4G0X9 1142 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 VWA5B1Q5TIE3 1220 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 PWWP2BQ6NUJ5 590 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 CYB5D1Q6P9G0 228 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 KRBA2Q6ZNG9 492 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 MED25Q71SY5 747 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 MARK2Q7KZI7 788 aaKnown RBP6.74□□□□□ -1.33
ATXN3-236ENST00000556220 ARCQ7LC44 396 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 KCNMB4Q86W47 210 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 GALNT13Q8IUC8 556 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 RELL1Q8IUW5 271 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 MMP21Q8N119 569 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 LZTR1Q8N653 840 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 RTL3Q8N8U3 475 aaKnown RBP6.74□□□□□ -1.33
ATXN3-236ENST00000556220 KLHL6Q8WZ60 621 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 DTD2Q96FN9 168 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 FAM81BQ96LP2 452 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 TGM7Q96PF1 710 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 HERPUD2Q9BSE4 406 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 RSRP1Q9BUV0 290 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 UCK1Q9HA47 277 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 PDE7BQ9NP56 450 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 CHST11Q9NPF2 352 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 AGPAT4Q9NRZ5 378 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 GOLGA6AQ9NYA3 693 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 OGFRQ9NZT2 677 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 CPNE7Q9UBL6 633 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 CNOT8Q9UFF9 292 aaKnown RBP6.74□□□□□ -1.33
ATXN3-236ENST00000556220 NTNG1Q9Y2I2 539 aa6.74□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF106Q9H2Y7 1883 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 KIR2DS5A0A0G2JLQ3 304 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 A0A0G2JNG1 304 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 A0A1B0GUH1 482 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 OR5K4A6NMS3 321 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 F5H423 210 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 J3KR12 359 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 KIR2DS3K7RE56 304 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PSMD11O00231 422 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 KIF1CO43896 1103 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PRICKLE3O43900 615 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RASSF9O75901 435 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 UBXN7O94888 489 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 HEXIM1O94992 359 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 SOD1P00441 154 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 HSP90AA1P07900 732 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 SNRPB2P08579 225 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 STSP08842 583 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 SLC2A4P14672 509 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 COX6B1P14854 86 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 AMD1P17707 334 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 NELFEP18615 380 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 CAPN3P20807 821 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 GPR1P46091 355 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 VAV2P52735 878 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RRADP55042 308 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 UBE2IP63279 158 aaKnown RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PDE1BQ01064 536 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 CHRNEQ04844 493 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms