RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MT-ND3P03897 115 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CCNYL3P0C7X3 344 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 NFKB1P19838 968 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GNLYP22749 145 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CDKN2BP42772 138 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 KPNA2P52292 529 aaKnown RBP14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GPR19Q15760 415 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZNF789Q5FWF6 425 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LRRC38Q5VT99 294 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FBXO38Q6PIJ6 1188 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RHOT1Q8IXI2 618 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 Q8NA96 180 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 IQCDQ96DY2 449 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DNAJC7Q99615 494 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CHP1Q99653 195 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 NRTNQ99748 197 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GPR87Q9BY21 358 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 XPO4Q9C0E2 1151 aaKnown RBP14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PDE7BQ9NP56 450 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HYOU1Q9Y4L1 999 aa14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PCDHGA9Q9Y5G4 932 aaKnown RBP14.02□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TLCD2A6NGC4 264 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PPP1R12AO14974 1030 aaPredicted RBP14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SEMA7AO75326 666 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MTHFD1P11586 935 aaKnown RBP14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PTGIRP43119 386 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DYNLT1P63172 113 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ABRQ12979 859 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PRR30Q53SZ7 412 aaPredicted RBP14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TMEM220Q6QAJ8 160 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MICALCLQ6ZW33 695 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SYVN1Q86TM6 617 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 KMT5CQ86Y97 462 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LILRA3Q8N6C8 439 aaPredicted RBP14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GALNT11Q8NCW6 608 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 BRSK1Q8TDC3 778 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TRABDQ9H4I3 376 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SMOXQ9NWM0 555 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FAM153AQ9UHL3 310 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LCMT1Q9UIC8 334 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 BTRCQ9Y297 605 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MAP4K5Q9Y4K4 846 aa14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DNMT3AQ9Y6K1 912 aaPredicted RBP14.01□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SSU72P8A0A1W2PR75 194 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SYCE3A1L190 88 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 F5H423 210 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 KRT1P04264 644 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LPOP22079 712 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RORAP35398 523 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SPAM1P38567 509 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ARHGAP25P42331 645 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HALP42357 657 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TUBB4BP68371 445 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HSD11B2P80365 405 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ACY1Q03154 408 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MSLNQ13421 630 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TUBB2AQ13885 445 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LLGL1Q15334 1064 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SLC1A5Q15758 541 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZNF658BQ4V348 819 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DNTTIP2Q5QJE6 756 aaKnown RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PLEKHS1Q5SXH7 462 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZFYVE27Q5T4F4 411 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 IZUMO3Q5VZ72 239 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 BPHLQ86WA6 291 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ATCAYQ86WG3 371 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RFX6Q8HWS3 928 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZNF567Q8N184 647 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SLC25A41Q8N5S1 370 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GDAP1Q8TB36 358 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CPT1CQ8TCG5 803 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TRAF3IP1Q8TDR0 691 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 THAP4Q8WY91 577 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RMDN2Q96LZ7 410 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FCRL5Q96RD9 977 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SRPK1Q96SB4 655 aaKnown RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CD180Q99467 661 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TUBB2BQ9BVA1 445 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 WWP1Q9H0M0 922 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CHST8Q9H2A9 424 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HRASLS2Q9NWW9 162 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PLEKHB1Q9UF11 243 aaPredicted RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SLC24A2Q9UI40 661 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FARSAQ9Y285 508 aaKnown RBP14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CSMD1Q96PZ7 3565 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ANKRD12Q6UB98 2062 aa14□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GLYATL1P3A0A0U1RQE8 302 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ARGFXA6NJG6 315 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 AGAP14A8MT82 685 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LCA5LO95447 670 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZFXP17010 805 aaPredicted RBP13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 VCLP18206 1134 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ANP32AP39687 249 aaKnown RBP13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ARCN1P48444 511 aaKnown RBP13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 NR2C2P49116 596 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 XIAPP98170 497 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms