RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	POLG	P54098	1239 aa	Predicted RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	CD81	P60033	236 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	BNC1	Q01954	994 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	TRAF2	Q12933	501 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	HSPB3	Q12988	150 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ZNF273	Q14593	569 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	VWC2	Q2TAL6	325 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	SETMAR	Q53H47	684 aa	Predicted RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	RAB6C	Q53S08	254 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PLA2G4F	Q68DD2	849 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	KRT39	Q6A163	491 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	FAM122C	Q6P4D5	195 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	FAM198B	Q6UWH4	519 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506		Q75L30	129 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ADCK2	Q7Z695	626 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	C1orf52	Q8N6N3	182 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	IQUB	Q8NA54	791 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PPP4R1	Q8TF05	950 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ASB5	Q8WWX0	329 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PIGT	Q969N2	578 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	OR1F2P	Q96R84	312 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	C16orf70	Q9BSU1	422 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	RAB6C	Q9H0N0	254 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	WNT5B	Q9H1J7	359 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	RASAL2	Q9UJF2	1139 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	MYO6	Q9UM54	1294 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	AMDHD2	Q9Y303	409 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ANKUB1	A6NFN9	424 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PI4K2B	G5E9Z4	385 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	MID1	O15344	667 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	MED24	O75448	989 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	CRYAB	P02511	175 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ATP5B	P06576	529 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	DANCR	P0C864	163 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	VDR	P11473	427 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	TLX1	P31314	330 aa	Predicted RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ARRB2	P32121	409 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PCYT1A	P49585	367 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	COG7	P83436	770 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	RBPJ	Q06330	500 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	TRAF3	Q13114	568 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PPIG	Q13427	754 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	CALCRL	Q16602	461 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ZNF260	Q3ZCT1	412 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	KLHL26	Q53HC5	615 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	AWAT2	Q6E213	333 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	SHQ1	Q6PI26	577 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	PPP1R21	Q6ZMI0	780 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	MFN1	Q8IWA4	741 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	MAP7D3	Q8IWC1	876 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	CCAR2	Q8N163	923 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	C9orf106	Q8NAJ2	232 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	OR2AJ1	Q8NGZ0	328 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	BBS10	Q8TAM1	723 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	SLC38A5	Q8WUX1	472 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ATL1	Q8WXF7	558 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	TANK	Q92844	425 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	FAM81B	Q96LP2	452 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ZNF558	Q96NG5	402 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	LRRC3B	Q96PB8	259 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	THUMPD3	Q9BV44	507 aa	Known RBP	4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	SEMA6A	Q9H2E6	1030 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	HHATL	Q9HCP6	504 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	ABCF3	Q9NUQ8	709 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	RHCG	Q9UBD6	479 aa		4.24	□□□□□ -1.73
KTN1-222	ENST00000555506	TRAV34	A0A0B4J273	112 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	ARHGEF37	A1IGU5	675 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	XRCC3	O43542	346 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SYNCRIP	O60506	623 aa	Known RBP	4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	CLDN14	O95500	239 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	OR52Z1	P0C646	297 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	HOXC13	P31276	330 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	HSPA4	P34932	840 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	TMPO	P42166	694 aa	Known RBP	4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	MTHFR	P42898	656 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	LIMK1	P53667	647 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	ZNF155	Q12901	538 aa	Predicted RBP	4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	HLF	Q16534	295 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	GCNT6	Q5T4J0	391 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	LCE1A	Q5T7P2	110 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	C11orf88	Q6PI97	169 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	C1orf87	Q8N0U7	546 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	CLIP4	Q8N3C7	705 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SLC4A11	Q8NBS3	891 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SPATA22	Q8NHS9	363 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	ZFAND2B	Q8WV99	257 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	ROBO4	Q8WZ75	1007 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	ABTB1	Q969K4	478 aa	Predicted RBP	4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SLAMF9	Q96A28	289 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SCMH1	Q96GD3	660 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SEPHS2	Q99611	448 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	MGME1	Q9BQP7	344 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	KRTAP1-5	Q9BYS1	174 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	XAB2	Q9HCS7	855 aa	Known RBP	4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	CHCHD3	Q9NX63	227 aa	Known RBP	4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	DPP3	Q9NY33	737 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	STK26	Q9P289	416 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	SIX4	Q9UIU6	781 aa		4.23	□□□□□ -1.73
KTN1-222	ENST00000555506	NFS1	Q9Y697	457 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms