RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SRP54P61011 504 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 YPEL5P62699 121 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 DPTQ07507 201 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 SF3A3Q12874 501 aaKnown RBP eCLIP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 EIF2B5Q13144 721 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 MSLNQ13421 630 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 FRG1Q14331 258 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ALG11Q2TAA5 492 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ATP13A5Q4VNC0 1218 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ATG16L1Q676U5 607 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ADAMTSL4Q6UY14 1074 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 MACC1Q6ZN28 852 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF765Q7L2R6 523 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 NLRP9Q7RTR0 991 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 TAS2R42Q7RTR8 314 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 PHACTR4Q8IZ21 702 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 PNPLA1Q8N8W4 532 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 OR56A4Q8NGH8 313 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 OR6P1Q8NGX9 317 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 LMX1AQ8TE12 382 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 CDKL2Q92772 493 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ERP27Q96DN0 273 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF778Q96MU6 729 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 CAMK1GQ96NX5 476 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 TRIM56Q9BRZ2 755 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ZSCAN5AQ9BUG6 496 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 SLC13A1Q9BZW2 595 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 OR2AG1Q9H205 316 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ASB8Q9H765 288 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 CARS2Q9HA77 564 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 FGF22Q9HCT0 170 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 CHRAC1Q9NRG0 131 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 RAD18Q9NS91 495 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 UCKL1Q9NWZ5 548 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 BFARQ9NZS9 450 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 ZNHIT2Q9UHR6 403 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 CDV3Q9UKY7 258 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 GPSM3Q9Y4H4 160 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 MAD1L1Q9Y6D9 718 aa9.74□□□□□ -0.85
PSEN1-213ENST00000555386 OAS3Q9Y6K5 1087 aaKnown RBP9.74□□□□□ -0.85
PSEN1-213ENST00000555386 A0A1B0GTQ1 180 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 HEATR9A2RTY3 570 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 RGSL1A5PLK6 1076 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CXorf49A8MYA2 514 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-213ENST00000555386 GOLGA8RI6L899 631 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 AP3B1O00203 1094 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CTSEP14091 401 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 KELP23276 732 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 AKT1P31749 480 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 MC4RP32245 332 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CA5AP35218 305 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 TRIM23P36406 574 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 NPY2RP49146 381 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CDKN1CP49918 316 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CCT8P50990 548 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 ARSDP51689 593 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 KIAA1024LP59773 190 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 DCDC1P59894 354 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 KCNJ2P63252 427 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 PDE1BQ01064 536 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 SHBQ15464 509 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 RSPO4Q2I0M5 234 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 PLA2G4EQ3MJ16 856 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 TSTD2Q5T7W7 516 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 FAM91A1Q658Y4 838 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 DET1Q7L5Y6 550 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CCDC91Q7Z6B0 441 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 TRAM1L1Q8N609 369 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 GLYATL1Q969I3 302 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 HDAC10Q969S8 669 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 TBATAQ96M53 351 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 C7orf26Q96N11 449 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 PLEKHG4BQ96PX9 1271 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 FAM111AQ96PZ2 611 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 TEX101Q9BY14 249 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 SMYD2Q9NRG4 433 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 APOBEC3BQ9UH17 382 aaKnown RBP9.73□□□□□ -0.85
PSEN1-213ENST00000555386 LNPEPQ9UIQ6 1025 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CRLS1Q9UJA2 301 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 CNOT6Q9ULM6 557 aaKnown RBP9.73□□□□□ -0.85
PSEN1-213ENST00000555386 SUFUQ9UMX1 484 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 TCAF1Q9Y4C2 921 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 SLC30A1Q9Y6M5 507 aa9.73□□□□□ -0.85
PSEN1-213ENST00000555386 PRSS38A1L453 326 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CCDC162PA2VCL2 907 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 MROH6A6NGR9 719 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 H3BM21 787 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 GOLGA8TH3BQL2 631 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 GAPDHSO14556 408 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 SH3BP5O60239 455 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PIAS1O75925 651 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 SRP72O76094 671 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 TNFP01375 233 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CEACAM5P06731 702 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms