RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 BICD1Q96G01 975 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 PRMT6Q96LA8 375 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF385AQ96PM9 386 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 OR1F2PQ96R84 312 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 MRPL1Q9BYD6 325 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 TMEM39BQ9GZU3 492 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 MMP27Q9H306 513 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 DENND2DQ9H6A0 471 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 MAGIXQ9H6Y5 334 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 CNOT10Q9H9A5 744 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 PCDH9Q9HC56 1237 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 MBNL1Q9NR56 388 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 MCM9Q9NXL9 1143 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 KLHL9Q9P2J3 617 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 SIX4Q9UIU6 781 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ANAPC5Q9UJX4 755 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 CCL27Q9Y4X3 112 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 PRAG1Q86YV5 1406 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 DOCK7Q96N67 2140 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 PDS5AQ29RF7 1337 aaKnown RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 EDDM13A0A1B0GTR0 161 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 MAGEA13PA6NCF6 341 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 GOLGA6L9A6NEM1 432 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 IFITM10A6NMD0 228 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF587BE7ETH6 402 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 KCNN4O15554 427 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 CELF2O95319 508 aaKnown RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 SNRNP70P08621 437 aaKnown RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 VPREB1P12018 145 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 CCR10P46092 362 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 CLCNKAP51800 687 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 HNRNPKP61978 463 aaKnown RBP eCLIP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 SIRPAP78324 504 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 SLC39A14Q15043 492 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 CBWD6Q4V339 395 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 CBWD3Q5JTY5 395 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ZDHHC20Q5W0Z9 365 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 KRT80Q6KB66 452 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 FAM122CQ6P4D5 195 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 BRAT1Q6PJG6 821 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 FIGLAQ6QHK4 219 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 CCNI2Q6ZMN8 369 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF534Q76KX8 674 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 IQCHQ86VS3 1027 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 MAP7D3Q8IWC1 876 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 SLC5A8Q8N695 610 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 PI4KAP1Q8N8J0 262 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 SLC38A5Q8WUX1 472 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 TANKQ92844 425 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF653Q96CK0 615 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 MTBPQ96DY7 904 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ERLEC1Q96DZ1 483 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 IGSF21Q96ID5 467 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF582Q96NG8 517 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 C16orf70Q9BSU1 422 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ALDH8A1Q9H2A2 487 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ERVMER34-1Q9H9K5 563 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 EBF2Q9HAK2 575 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 GRPEL1Q9HAV7 217 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 UBA2Q9UBT2 640 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 KCNG2Q9UJ96 466 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF112Q9UJU3 913 aa3.02□□□□□ -1.93
SCFD1-213ENST00000554776 NOL7Q9UMY1 257 aaKnown RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 WBP11Q9Y2W2 641 aaKnown RBP3.02□□□□□ -1.93
SCFD1-213ENST00000554776 PTPRCP08575 1304 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF644Q9H582 1327 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TCRBV21S2A2A0A5A6 115 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 HEPACAM2A8MVW5 462 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TMEM178BH3BS89 294 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TULP2O00295 520 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TO15178 435 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 IPO8O15397 1037 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 NDUFS4O43181 175 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 XRCC3O43542 346 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TBCAO75347 108 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 WISP2O76076 250 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TOMM70O94826 608 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 PENKP01210 267 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 OR52Z1P0C646 297 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 FDPSP14324 419 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 MYOD1P15172 320 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 PFKFB1P16118 471 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 S1PR1P21453 382 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 KCNA5P22460 613 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 NR2F2P24468 414 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TMPOP42166 694 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 FASLGP48023 281 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SNRPEP62304 92 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TROAPQ12815 778 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 MELKQ14680 651 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 MVPQ14764 893 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TNIP1Q15025 636 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 KLHL26Q53HC5 615 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 HECTD3Q5T447 861 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 CAVIN1Q6NZI2 390 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TRAT1Q6PIZ9 186 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 RBPMS2Q6ZRY4 209 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TPRG1Q6ZUI0 275 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 CENPVQ7Z7K6 275 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SATL1Q86VE3 508 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms