RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RMDN2Q96LZ7 410 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 NLRP4Q96MN2 994 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 CMKLR1Q99788 373 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 MLPHQ9BV36 600 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-209ENST00000553280 FUT8Q9BYC5 575 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 ZBTB40Q9NUA8 1239 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 AGO1Q9UL18 857 aaKnown RBP4.92□□□□□ -1.62
SCFD1-209ENST00000553280 LIPT1Q9Y234 373 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 KLHL20Q9Y2M5 609 aa4.92□□□□□ -1.62
SCFD1-209ENST00000553280 A0A1W2PP11 408 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 FEZF1A0PJY2 475 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 BICDL2A1A5D9 508 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 TMEM221A6NGB7 291 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 SMTNL1A8MU46 457 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 XRCC3O43542 346 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GAGE7O76087 117 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 SYF2O95926 243 aaKnown RBP4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 ADRA2CP18825 462 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 EEF1B2P24534 225 aaKnown RBP4.91□□□□□ -1.62
SCFD1-209ENST00000553280 PRKCIP41743 596 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 MMP13P45452 471 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 ABCG1P45844 678 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 RFX2P48378 723 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 AMTP48728 403 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 SRSF4Q08170 494 aaKnown RBP4.91□□□□□ -1.62
SCFD1-209ENST00000553280 CRYZQ08257 329 aaKnown RBP4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GAGE1Q13065 139 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GAGE4Q13068 117 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 GPS2Q13227 327 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 PRTGQ2VWP7 1150 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 LEXMQ3ZCV2 418 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 MTX3Q5HYI7 312 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 SFMBT2Q5VUG0 894 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 ZNF626Q68DY1 528 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 WDR73Q6P4I2 378 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 MOXD1Q6UVY6 613 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 LINC00696Q6ZRV3 163 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 CHCHD4Q8N4Q1 142 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 OR5R1Q8NH85 324 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 FIBINQ8TAL6 211 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 SPDL1Q96EA4 605 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 CAMK1GQ96NX5 476 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 MTERF1Q99551 399 aaKnown RBP4.91□□□□□ -1.62
SCFD1-209ENST00000553280 SEPHS2Q99611 448 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 FZD8Q9H461 694 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 DBNDD1Q9H9R9 158 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 HHATLQ9HCP6 504 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 NME7Q9Y5B8 376 aa4.91□□□□□ -1.62
SCFD1-209ENST00000553280 LY6G6EA0A0G2JKS1 128 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 A0A1B0GVT2 93 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 A0A1W2PPQ1 181 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 hDV102S1A0JD36 115 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 OR2M5A3KFT3 312 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 A4D1N5 150 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 PLK4O00444 970 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 IFIT3O14879 490 aaKnown RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 FAM58BPP0C7Q3 252 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 SUPT20HL2P0C7V6 817 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 TGFB3P10600 412 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 ABATP80404 500 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 ROR2Q01974 943 aaKnown RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 MZT1Q08AG7 82 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 SRSF7Q16629 238 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 RAB6CQ53S08 254 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 FAM91A1Q658Y4 838 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 RGMBQ6NW40 437 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 C11orf57Q6ZUT1 292 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 OTOAQ7RTW8 1153 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 SPATA21Q7Z572 469 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 MRPL10Q7Z7H8 261 aaKnown RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 TIGD4Q8IY51 512 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 SRRM1Q8IYB3 904 aaKnown RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 OR2AJ1Q8NGZ0 328 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 MOSPD2Q8NHP6 518 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 OCC1Q8TAD7 63 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 GRAPLQ8TC17 118 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 TXNDC15Q96J42 360 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 FAM81BQ96LP2 452 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 QRFPRQ96P65 431 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 INTS14Q96SY0 518 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 FEVQ99581 238 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 SLC25A33Q9BSK2 321 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 RAB6CQ9H0N0 254 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 MMADHCQ9H3L0 296 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 NOX4Q9NPH5 578 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 COQ3Q9NZJ6 369 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 STK26Q9P289 416 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 LEF1Q9UJU2 399 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-209ENST00000553280 SNX7Q9UNH6 387 aa4.9□□□□□ -1.63
SCFD1-209ENST00000553280 OR6C75A6NL08 312 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 INAFM1C9JVW0 142 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 CLDN4O14493 209 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 RAB40ALP0C0E4 278 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 OR2T7P0C7T2 308 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 HOXB2P14652 356 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms