RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 KLC4Q9NSK0 619 aa15.16■□□□□ 0.02
BRF1-220ENST00000552127 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
BRF1-220ENST00000552127 AAR2Q9Y312 384 aaKnown RBP15.16■□□□□ 0.02
BRF1-220ENST00000552127 KCNMB2Q9Y691 235 aa15.16■□□□□ 0.02
BRF1-220ENST00000552127 LOC101059948A0A1B0GTJ6 334 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 OR5K4A6NMS3 321 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 MKRN2OSH3BPM6 223 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 BUD23O43709 281 aaKnown RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 CDK14O94921 469 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 ZNF7P17097 686 aaPredicted RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 LIMK2P53671 638 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 GSDMDP57764 484 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 KLF1Q13351 362 aaPredicted RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 NFATC2Q13469 925 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 OLIG2Q13516 323 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 TRA2AQ13595 282 aaKnown RBP eCLIP15.15■□□□□ 0.02
BRF1-220ENST00000552127 ITGA9Q13797 1035 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 GTF2H3Q13889 308 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 EIF2S3LQ2VIR3 472 aaKnown RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 C16orf46Q6P387 395 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 RANBP10Q6VN20 620 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 SLC9B2Q86UD5 537 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 ZNF547Q8IVP9 402 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 UNC5BQ8IZJ1 945 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 AVL9Q8NBF6 648 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 OR4D9Q8NGE8 314 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 OR10G6Q8NH81 332 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 GDAP1Q8TB36 358 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 KIAA1143Q96AT1 154 aaPredicted RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 SH3KBP1Q96B97 665 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 HES6Q96HZ4 224 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 APOL2Q9BQE5 337 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 DDA1Q9BW61 102 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 TSGA10Q9BZW7 698 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 ZCCHC2Q9C0B9 1178 aaKnown RBP15.15■□□□□ 0.02
BRF1-220ENST00000552127 SLC23A2Q9UGH3 650 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 PILRAQ9UKJ1 303 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 PIKFYVEQ9Y2I7 2098 aa15.15■□□□□ 0.02
BRF1-220ENST00000552127 GAPDHSO14556 408 aaPredicted RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 STX7O15400 261 aaKnown RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 GPR39O43194 453 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 THRAP10827 490 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 PPM1FP49593 454 aaPredicted RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 EPHA4P54764 986 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 UBE2IP63279 158 aaKnown RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 TMEM115Q12893 351 aaPredicted RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 TAF1AQ15573 450 aaPredicted RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 LDLRAP1Q5SW96 308 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 ARHGEF18Q6ZSZ5 1173 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 TRAPPC5Q8IUR0 188 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 DDHD1Q8NEL9 900 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 BRSK1Q8TDC3 778 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 STARD8Q92502 1023 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 AHCYL2Q96HN2 611 aaKnown RBP15.14■□□□□ 0.01
BRF1-220ENST00000552127 TBL1YQ9BQ87 522 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 EFHD1Q9BUP0 239 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 SMOXQ9NWM0 555 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 TMEM9Q9P0T7 183 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 CPNE7Q9UBL6 633 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 DNAJC16Q9Y2G8 782 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 KCTD3Q9Y597 815 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 ARL5AQ9Y689 179 aa15.14■□□□□ 0.01
BRF1-220ENST00000552127 HIVEP1P15822 2718 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 C5orf60A6NFR6 353 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 C2orf81A6NN90 581 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 PDZK1P1A8MUH7 402 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 PRAMEF1O95521 474 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 VCLP18206 1134 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 TCN2P20062 427 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 LPOP22079 712 aaPredicted RBP15.13■□□□□ 0.01
BRF1-220ENST00000552127 PTPRCAPQ14761 206 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 GPRC6AQ5T6X5 926 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 TMEM71Q6P5X7 295 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 C11orf96Q7Z7L8 435 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 KLHDC8BQ8IXV7 354 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 NLGN4XQ8N0W4 816 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 NLGN4YQ8NFZ3 816 aaPredicted RBP15.13■□□□□ 0.01
BRF1-220ENST00000552127 SLC35B2Q8TB61 432 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 PRR7Q8TB68 274 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 LRRC45Q96CN5 670 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 TCTN2Q96GX1 697 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 TTC25Q96NG3 672 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.13■□□□□ 0.01
BRF1-220ENST00000552127 ASPSCR1Q9BZE9 553 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 SLC39A1Q9NY26 324 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 SCHIP1Q9P0W5 487 aaPredicted RBP15.13■□□□□ 0.01
BRF1-220ENST00000552127 R3HDM2Q9Y2K5 976 aaKnown RBP15.13■□□□□ 0.01
BRF1-220ENST00000552127 MAP4K5Q9Y4K4 846 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 AKAP9Q99996 3911 aa15.13■□□□□ 0.01
BRF1-220ENST00000552127 TNRC6AQ8NDV7 1962 aaKnown RBP15.13■□□□□ 0.01
BRF1-220ENST00000552127 TCRBV7S2A1N4TA0A589 114 aa15.12■□□□□ 0.01
BRF1-220ENST00000552127 LILRA5A6NI73 299 aa15.12■□□□□ 0.01
BRF1-220ENST00000552127 KRT86O43790 486 aa15.12■□□□□ 0.01
BRF1-220ENST00000552127 UGT1A9O60656 530 aa15.12■□□□□ 0.01
BRF1-220ENST00000552127 CRTAMO95727 393 aa15.12■□□□□ 0.01
BRF1-220ENST00000552127 LDLRP01130 860 aa15.12■□□□□ 0.01
BRF1-220ENST00000552127 PDGFAP04085 211 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms