RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 PPP1CAP62136 330 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 NOMO3P69849 1222 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 PDE1BQ01064 536 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 TRAF2Q12933 501 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 GPS2Q13227 327 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 ATP1A4Q13733 1029 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 PCM1Q15154 2024 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 TESK1Q15569 626 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 MSMPQ1L6U9 139 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 LYPLAL1Q5VWZ2 237 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 HGSNATQ68CP4 663 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 LCN10Q6JVE6 187 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SCYL2Q6P3W7 929 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 CERS6Q6ZMG9 384 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 ARHGAP36Q6ZRI8 547 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 STRADAQ7RTN6 431 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SLFN11Q7Z7L1 901 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 CUZD1Q86UP6 607 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 FJX1Q86VR8 437 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 TRIM48Q8IWZ4 208 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 FAM71AQ8IYT1 594 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 ZBTB2Q8N680 514 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 ARFGAP1Q8N6T3 406 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 ENDOVQ8N8Q3 282 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 TMEM102Q8N9M5 508 aaPredicted RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 GLIS1Q8NBF1 620 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 AVL9Q8NBF6 648 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SIDT2Q8NBJ9 832 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 UBASH3BQ8TF42 649 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 KLHL6Q8WZ60 621 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 CENPIQ92674 756 aaPredicted RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 RSC1A1Q92681 617 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SGSM3Q96HU1 749 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SMIM14Q96QK8 99 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 BARD1Q99728 777 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 MLPHQ9BV36 600 aaPredicted RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 RIOK2Q9BVS4 552 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SLC39A8Q9C0K1 460 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 OSGEPL1Q9H4B0 414 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 LRRC19Q9H756 370 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 SIX2Q9NPC8 291 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 AGPAT4Q9NRZ5 378 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 C5AR2Q9P296 337 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 HIVEP2P31629 2446 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 IGHV5-51A0A0C4DH38 117 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 DFFAO00273 331 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 E2F3O00716 465 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 FGF10O15520 208 aaPredicted RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ICMTO60725 284 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 CPNE3O75131 537 aaKnown RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 SOCS5O75159 536 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 MMEP08473 750 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 EBLN1P0CF75 366 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 COX6B1P14854 86 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 CA5AP35218 305 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 PTGER4P35408 488 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 CAPZBP47756 277 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ARL4DP49703 201 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 RENBPP51606 427 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 VAV2P52735 878 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 RRADP55042 308 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ACY1Q03154 408 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 NSUN2Q08J23 767 aaKnown RBP eCLIP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 SLC10A7Q0GE19 358 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ART3Q13508 389 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF235Q14590 738 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 LLGL1Q15334 1064 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ANO6Q4KMQ2 910 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 CRB2Q5IJ48 1285 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 MIIPQ5JXC2 388 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF648Q5T619 568 aaPredicted RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ERICH6BQ5W0A0 696 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 LRRC66Q68CR7 880 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 CYB5D1Q6P9G0 228 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 SPNS3Q6ZMD2 512 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 USP45Q70EL2 814 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 MED25Q71SY5 747 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 KCNMB4Q86W47 210 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 TMEM126BQ8IUX1 230 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 PHYKPLQ8IUZ5 450 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 MMP21Q8N119 569 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 TTC30BQ8N4P2 665 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZADH2Q8N4Q0 377 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 SNX21Q969T3 373 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZDHHC12Q96GR4 267 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 COX14Q96I36 57 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 SLC41A2Q96JW4 573 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ZNF514Q96K75 400 aaPredicted RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 FCRL4Q96PJ5 515 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 PSKH2Q96QS6 385 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 MCCC1Q96RQ3 725 aaPredicted RBP5.26□□□□□ -1.57
HOXB3-213ENST00000552000 C11orf70Q9BRQ4 267 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 UCK1Q9HA47 277 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 NOD2Q9HC29 1040 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 ARFGAP3Q9NP61 516 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 WASH6PQ9NQA3 447 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 FGF21Q9NSA1 209 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 KLC4Q9NSK0 619 aa5.26□□□□□ -1.57
HOXB3-213ENST00000552000 GPATCH2LQ9NWQ4 482 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms