RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PROCP04070 461 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 NT5EP21589 574 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SERPINB1P30740 379 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CCT8P50990 548 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CDH13P55290 713 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MRPL28Q13084 256 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 LAPTM5Q13571 262 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 INTS11Q5TA45 600 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CMASQ8NFW8 434 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 PIWIL2Q8TC59 973 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MRPL38Q96DV4 380 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 KCTD14Q9BQ13 255 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 DENND2DQ9H6A0 471 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CCDC167Q9P0B6 97 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 KLF15Q9UIH9 416 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 TMEM150CB9EJG8 249 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 KIAA0355O15063 1070 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 STC2O76061 302 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 HLA-DQB2P05538 268 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 FCGR1AP12314 374 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CMC1Q7Z7K0 106 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 LUZP2Q86TE4 346 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 PPCDCQ96CD2 204 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 EBF2Q9HAK2 575 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MRPS30Q9NP92 439 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 HCFC1R1Q9NWW0 138 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 OSER1Q9NX31 292 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 COL4A1P02462 1669 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 LINC01553A4QN01 128 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SLC7A4O43246 635 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 LEFTY1O75610 366 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CDH5P33151 784 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 TMED10P49755 219 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 GDF10P55107 478 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CSTF1Q05048 431 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 PPIDQ08752 370 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SEMA5AQ13591 1074 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 TXNRD3NBQ6F5E7 133 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 ARCQ7LC44 396 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 ZSCAN1Q8NBB4 408 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 KAT6AQ92794 2004 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 TPD52L3Q96J77 140 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MCMBPQ9BTE3 642 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 EPS8L2Q9H6S3 715 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 COPS7AQ9UBW8 275 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 PRKAB1Q9Y478 270 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 AXIN1O15169 862 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 IPO13O94829 963 aaKnown RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SERPINA6P08185 405 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 PIM1P11309 404 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 IL1R2P27930 398 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 ZNF132P52740 706 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SLC25A3Q00325 362 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 ULK2Q8IYT8 1036 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MPP5Q8N3R9 675 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 ZDHHC3Q9NYG2 299 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 BTRCQ9Y297 605 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MTF2Q9Y483 593 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 KRT75O95678 551 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 CASRP41180 1078 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 CLDN10P78369 228 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 OGDHQ02218 1023 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 FRG1Q14331 258 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 ZNF805Q5CZA5 627 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 FGD3Q5JSP0 725 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 SLC36A4Q6YBV0 504 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 RTL10Q7L3V2 364 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 DDHD1Q8NEL9 900 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 NDC1Q9BTX1 674 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 SPATA5L1Q9BVQ7 753 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 POLR1BQ9H9Y6 1135 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 DDX18Q9NVP1 670 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 B4GALT6Q9UBX8 382 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 ECM29Q5VYK3 1845 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 MRASO14807 208 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 KMOO15229 486 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 BIRC5O15392 142 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 TSPAN6O43657 245 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 MATN4O95460 622 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 CLDN7O95471 211 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 C8GP07360 202 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 FGFR3P22607 806 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 IGFALSP35858 605 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 HSD17B2P37059 387 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 UBAP2LQ14157 1087 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 OASLQ15646 514 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 PIK3R6Q5UE93 754 aa12.03□□□□□ -0.48
NR4A1-215ENST00000550557 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
NR4A1-215ENST00000550557 NSMCE2Q96MF7 247 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms