RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LINC00523Q86TU6 105 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 TRIM48Q8IWZ4 208 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 CFAP206Q8IYR0 622 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 BMPERQ8N8U9 685 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 UBE2Q2Q8WVN8 375 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 ART4Q93070 314 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 HDAC10Q969S8 669 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 CXorf40BQ96DE9 158 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 CMKLR1Q99788 373 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 CTRCQ99895 268 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 ZCCHC2Q9C0B9 1178 aaKnown RBP9.58□□□□□ -0.88
HDAC7-229ENST00000549883 ZMYND15Q9H091 742 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 IMP3Q9NV31 184 aaKnown RBP9.58□□□□□ -0.88
HDAC7-229ENST00000549883 ZDHHC3Q9NYG2 299 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 PAK5Q9P286 719 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 PDP2Q9P2J9 529 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 PYCARDQ9ULZ3 195 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 CACNA1GO43497 2377 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 LOC400499M0QZD8 3231 aa9.58□□□□□ -0.88
HDAC7-229ENST00000549883 NBEAQ8NFP9 2946 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 EFCAB7A8K855 629 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ERI2A8K979 691 aaKnown RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 TMX2-CTNND1H3BSU7 103 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 UBXN7O94888 489 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 GOT2P00505 430 aaKnown RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 C9P02748 559 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 MTHFD1P11586 935 aaKnown RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ATP1B2P14415 290 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 SLC2A4P14672 509 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 VCLP18206 1134 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 WT1P19544 449 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 NMBRP28336 390 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 PDHA2P29803 388 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 PREPP48147 710 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ARCN1P48444 511 aaKnown RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 EPHA4P54764 986 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 CXADRP78310 365 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 BASP1P80723 227 aaKnown RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 CACNG1Q06432 222 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 CLPPQ16740 277 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 GPR33Q49SQ1 333 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ANKRD22Q5VYY1 191 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ANKS6Q68DC2 871 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 WDR74Q6RFH5 385 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 CES3Q6UWW8 571 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 GSTA5Q7RTV2 222 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 VASH2Q86V25 355 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 FAM129CQ86XR2 697 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 SPNS2Q8IVW8 549 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 OR2L2Q8NH16 312 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 SH3KBP1Q96B97 665 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ULK4Q96C45 1275 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 DCUN1D1Q96GG9 259 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 PDLIM2Q96JY6 352 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 LINC00615Q96LM1 132 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 C12orf66Q96MD2 445 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 TGM7Q96PF1 710 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 OSBPL9Q96SU4 736 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 COPS8Q99627 209 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 TRIM56Q9BRZ2 755 aaKnown RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 APMAPQ9HDC9 416 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 CHRAC1Q9NRG0 131 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 MARCH4Q9P2E8 410 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 JRKLQ9Y4A0 524 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 TCAF1Q9Y4C2 921 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 PCDHGA7Q9Y5G6 932 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 B3GALT1Q9Y5Z6 326 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
HDAC7-229ENST00000549883 ITPR1Q14643 2758 aa9.57□□□□□ -0.88
HDAC7-229ENST00000549883 MN1Q10571 1320 aaPredicted RBP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 MGAQ8IWI9 3026 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 HEATR9A2RTY3 570 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 HGSO14964 777 aaPredicted RBP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 FANCGO15287 622 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 NVLO15381 856 aaKnown RBP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 NRDCO43847 1150 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 AVILO75366 819 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 F7P08709 466 aaPredicted RBP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 AMD1P17707 334 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 ADRA1DP25100 572 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 MGAT1P26572 445 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 ARNTP27540 789 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 CSTF2P33240 577 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 SEPHS1P49903 392 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 SH3BP2P78314 561 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 ACVR1Q04771 509 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 TRA2AQ13595 282 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 BRD3Q15059 726 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 SKIDA1Q1XH10 827 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 SOWAHCQ53LP3 525 aaPredicted RBP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 ARHGAP40Q5TG30 622 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 CAPRIN2Q6IMN6 1127 aaKnown RBP9.56□□□□□ -0.88
HDAC7-229ENST00000549883 FBXO38Q6PIJ6 1188 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 CERS6Q6ZMG9 384 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 FAM92BQ6ZTR7 304 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 MPP5Q8N3R9 675 aa9.56□□□□□ -0.88
HDAC7-229ENST00000549883 AGBL5Q8NDL9 886 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms