RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 VPS11Q9H270 941 aa6.5□□□□□ -1.37
UBE2N-204ENST00000549833 LRRC19Q9H756 370 aa6.5□□□□□ -1.37
UBE2N-204ENST00000549833 VPS51Q9UID3 782 aa6.5□□□□□ -1.37
UBE2N-204ENST00000549833 SLCO3A1Q9UIG8 710 aa6.5□□□□□ -1.37
UBE2N-204ENST00000549833 ERVW-1Q9UQF0 538 aa6.5□□□□□ -1.37
UBE2N-204ENST00000549833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBE2N-204ENST00000549833 RAD54BQ9Y620 910 aa6.5□□□□□ -1.37
UBE2N-204ENST00000549833 ASCC3Q8N3C0 2202 aaKnown RBP6.5□□□□□ -1.37
UBE2N-204ENST00000549833 PLXNB3Q9ULL4 1909 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 CNOT1A5YKK6 2376 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ARHGAP42A6NI28 874 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TTC34A8MYJ7 566 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 MIF4GDA9UHW6 222 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 J3KR12 359 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 K7ERQ8 282 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 APOL1O14791 398 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TIMM44O43615 452 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 KDELR3O43731 214 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 B3GALT2O43825 422 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ZMPSTE24O75844 475 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ATP5BP06576 529 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 DLDP09622 509 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TNFRSF1AP19438 455 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 MGAT1P26572 445 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 AVPR2P30518 371 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 IL12RB1P42701 662 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 RPS9P46781 194 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 CLCN5P51795 746 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 NDST2P52849 883 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 YBEYP58557 167 aaPredicted RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 MRPS21P82921 87 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ARF5P84085 180 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ECT2LQ008S8 904 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 SATB1Q01826 763 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 GBE1Q04446 702 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 SULT2A1Q06520 285 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 SLC10A2Q12908 348 aaPredicted RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 PAFAH1B3Q15102 231 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 RPS6KA1Q15418 735 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TAZQ16635 292 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 C3orf36Q3SXR2 165 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TFDP3Q5H9I0 405 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TMEM31Q5JXX7 168 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 FAM182AQ5T1J6 154 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 SLC9A4Q6AI14 798 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ZNF783Q6ZMS7 281 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 B4GALNT4Q76KP1 1039 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 VSIG1Q86XK7 387 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 UBL4BQ8N7F7 174 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 PLD5Q8N7P1 536 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 DCAF4L2Q8NA75 395 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TRIM58Q8NG06 486 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 CASKIN2Q8WXE0 1202 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 HAUS1Q96CS2 278 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 RBM41Q96IZ5 413 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 PLEKHG4BQ96PX9 1271 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 LRFN3Q9BTN0 628 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 HEMGNQ9BXL5 484 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 TLR10Q9BXR5 811 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 MAK16Q9BXY0 300 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 CPEB1Q9BZB8 566 aaKnown RBP6.49□□□□□ -1.37
UBE2N-204ENST00000549833 RETREG1Q9H6L5 497 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 SLC25A13Q9UJS0 675 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 MMP17Q9ULZ9 603 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 STON1Q9Y6Q2 735 aa6.49□□□□□ -1.37
UBE2N-204ENST00000549833 ZNF487B1APH4 448 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SMAD6O43541 496 aaKnown RBP6.48□□□□□ -1.37
UBE2N-204ENST00000549833 KIF5CO60282 957 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 CST8O60676 142 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 PRAMEF11O60813 436 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 CD160O95971 181 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ATP1A1P05023 1023 aaKnown RBP6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SRPRAP08240 638 aaKnown RBP6.48□□□□□ -1.37
UBE2N-204ENST00000549833 RAP2AP10114 183 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SRCP12931 536 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 HOXB2P14652 356 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ALOX15P16050 662 aaPredicted RBP6.48□□□□□ -1.37
UBE2N-204ENST00000549833 PECAM1P16284 738 aaPredicted RBP6.48□□□□□ -1.37
UBE2N-204ENST00000549833 NTSR1P30989 418 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 CXCR5P32302 372 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SERPINB6P35237 376 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 MAGEA9P43362 315 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ST8SIA6P61647 398 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 FAM193AP78312 1265 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 GALNT2Q10471 571 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 FOXE3Q13461 319 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ENPP2Q13822 863 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 DLG2Q15700 870 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 PARP15Q460N3 678 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ACCSLQ4AC99 568 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 EOGTQ5NDL2 527 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 TSSK4Q6SA08 328 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SERPINA13PQ6UXR4 307 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 TRMT11Q7Z4G4 463 aaKnown RBP6.48□□□□□ -1.37
UBE2N-204ENST00000549833 GGNQ86UU5 652 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SPEM1Q8N4L4 309 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 SH2D3CQ8N5H7 860 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ATPAF2Q8N5M1 289 aa6.48□□□□□ -1.37
UBE2N-204ENST00000549833 ATP11CQ8NB49 1132 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms