RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-215ENST00000549523 CLIP3Q96DZ5 547 aa11.31□□□□□ -0.6
USP15-215ENST00000549523 CCDC120Q96HB5 630 aa11.31□□□□□ -0.6
USP15-215ENST00000549523 FER1L6-AS2Q96M78 137 aa11.31□□□□□ -0.6
USP15-215ENST00000549523 NUP85Q9BW27 656 aa11.31□□□□□ -0.6
USP15-215ENST00000549523 POLR1EQ9GZS1 481 aaKnown RBP11.31□□□□□ -0.6
USP15-215ENST00000549523 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
USP15-215ENST00000549523 P4HTMQ9NXG6 502 aa11.31□□□□□ -0.6
USP15-215ENST00000549523 PKD2L2Q9NZM6 624 aa11.31□□□□□ -0.6
USP15-215ENST00000549523 NFKBIL1Q9UBC1 381 aaPredicted RBP11.31□□□□□ -0.6
USP15-215ENST00000549523 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 CCDC78A2IDD5 438 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 ANKRD62A6NC57 917 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 C19orf84I3L1E1 186 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 VEGFDO43915 354 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 MMP2P08253 660 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 HADHAP40939 763 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 ARL4DP49703 201 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 ZNF135P52742 658 aaPredicted RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 KCNK10P57789 538 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 POLR2FP61218 127 aaKnown RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 RPL26P61254 145 aaKnown RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 SSPNQ14714 243 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 PLCL1Q15111 1095 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 DPYSL2Q16555 572 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 ANKRD20A8PQ5CZ79 823 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 VWA2Q5GFL6 755 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 DCUN1D2Q6PH85 259 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 TMCO3Q6UWJ1 677 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 CARFQ8N187 725 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP15-215ENST00000549523 TRAM1L1Q8N609 369 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 CLEC1AQ8NC01 280 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 MAML1Q92585 1016 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 IP6K3Q96PC2 410 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 TRIM56Q9BRZ2 755 aaKnown RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 DHRS4Q9BTZ2 278 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 SPATA16Q9BXB7 569 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 PCDH9Q9HC56 1237 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 HRASLS2Q9NWW9 162 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 TAS2R14Q9NYV8 317 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 RPL26L1Q9UNX3 145 aaKnown RBP11.3□□□□□ -0.6
USP15-215ENST00000549523 PCM1Q15154 2024 aa11.3□□□□□ -0.6
USP15-215ENST00000549523 JMJD1CQ15652 2540 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 SLC9B1P1A6NJY1 282 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 H3BMH7 237 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 PCDH17O14917 1159 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 UMODP07911 640 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 CD99P14209 185 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 ARCN1P48444 511 aaKnown RBP11.29□□□□□ -0.6
USP15-215ENST00000549523 DMPKQ09013 629 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
USP15-215ENST00000549523 CDSNQ15517 529 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 CAMK4Q16566 473 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 B3GNTL1Q67FW5 361 aaPredicted RBP11.29□□□□□ -0.6
USP15-215ENST00000549523 PLEKHA7Q6IQ23 1121 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 KLHL35Q6PF15 583 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 MRGPRGQ86SM5 289 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 ZNF808Q8N4W9 903 aaPredicted RBP11.29□□□□□ -0.6
USP15-215ENST00000549523 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 SYT11Q9BT88 431 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 ZSCAN5AQ9BUG6 496 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 ZWILCHQ9H900 591 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 NLRC4Q9NPP4 1024 aa11.29□□□□□ -0.6
USP15-215ENST00000549523 CSPG4Q6UVK1 2322 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 TMEM191CA6NGB0 347 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 ANKRD66B4E2M5 251 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 TMEM150CB9EJG8 249 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 LDB2O43679 373 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 PRPSAP2O60256 369 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 ALOX12BO75342 701 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 JRKO75564 520 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 CDK14O94921 469 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 HLA-DQB2P05538 268 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 CBSLP0DN79 551 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
USP15-215ENST00000549523 CBSP35520 551 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 CDC16Q13042 620 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 TMTC4Q5T4D3 741 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 PDPK2PQ6A1A2 396 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 TXNRD3NBQ6F5E7 133 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 ACBD4Q8NC06 268 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 OR2Y1Q8NGV0 311 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 TRIB3Q96RU7 358 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 DPH2Q9BQC3 489 aaPredicted RBP11.28□□□□□ -0.6
USP15-215ENST00000549523 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 SLC24A2Q9UI40 661 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 POMT2Q9UKY4 750 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 PSMD13Q9UNM6 376 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 PADI2Q9Y2J8 665 aa11.28□□□□□ -0.6
USP15-215ENST00000549523 CFAP20Q9Y6A4 193 aaKnown RBP11.28□□□□□ -0.6
USP15-215ENST00000549523 STAB1Q9NY15 2570 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms