RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 CEACAM20Q6UY09 585 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 FAM92BQ6ZTR7 304 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 DET1Q7L5Y6 550 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 TIPARPQ7Z3E1 657 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 C11orf96Q7Z7L8 435 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 TMTC1Q8IUR5 882 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NLGN4XQ8N0W4 816 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NLGN4YQ8NFZ3 816 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 OR4K2Q8NGD2 314 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 ACTL9Q8TC94 416 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NAT14Q8WUY8 206 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 C9orf72Q96LT7 481 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 TEFMQ96QE5 360 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 OR6C1Q96RD1 312 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PANX2Q96RD6 677 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 FERMT1Q9BQL6 677 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 ZPBPQ9BS86 351 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 SLC12A9Q9BXP2 914 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 OSBPL8Q9BZF1 889 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 SPRY4Q9C004 299 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 GPN2Q9H9Y4 310 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 UCK1Q9HA47 277 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 FAM8A1Q9UBU6 413 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 AAR2Q9Y312 384 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 KCTD3Q9Y597 815 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PCDHA3Q9Y5H8 950 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 ARL5AQ9Y689 179 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 MGAQ8IWI9 3026 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 RP1P56715 2156 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PTPRQQ9UMZ3 2332 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 SMG1Q96Q15 3661 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 CFAP46Q8IYW2 2715 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 LOC101059948A0A1B0GTJ6 334 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 C2orf81A6NN90 581 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 GAPDHSO14556 408 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 KCNJ13O60928 360 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ANXA9O76027 345 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 STK10O94804 968 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 TJP3O95049 919 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 POLBP06746 335 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RBP3P10745 1247 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 PYGMP11217 842 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 SFTPCP11686 197 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF28P17035 718 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 MSH3P20585 1137 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 LPOP22079 712 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 PSMB4P28070 264 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 CTNNA1P35221 906 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 CETN2P41208 172 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 CTSCP53634 463 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RWDD2BP57060 319 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ITGA9Q13797 1035 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 NFE2L1Q14494 772 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RPE65Q16518 533 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 LONRF2Q1L5Z9 754 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ANKRD20A2Q5SQ80 823 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ANKRD20A1Q5TYW2 823 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ANKRD20A3Q5VUR7 823 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ITPRIPL1Q6GPH6 555 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 AADACL2Q6P093 401 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 C16orf46Q6P387 395 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 BORAQ6PGQ7 559 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 WASH2PQ6VEQ5 465 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RANBP10Q6VN20 620 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RAD9BQ6WBX8 426 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 FAM83HQ6ZRV2 1179 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RASGRP3Q8IV61 690 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 BEND7Q8N7W2 519 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 CCDC110Q8TBZ0 833 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 DTX3LQ8TDB6 740 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 RSC1A1Q92681 617 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ZDHHC12Q96GR4 267 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ULBP3Q9BZM4 244 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ZCCHC2Q9C0B9 1178 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 LACRTQ9GZZ8 138 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 GBA3Q9H227 469 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 FAM96AQ9H5X1 160 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ASB8Q9H765 288 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 WASH6PQ9NQA3 447 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 STARD5Q9NSY2 213 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 POT1Q9NUX5 634 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 IMP3Q9NV31 184 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 IL17BQ9UHF5 180 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 FKBPLQ9UIM3 349 aa6.57□□□□□ -1.36
SCAF11-211ENST00000547950 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 CFAP20Q9Y6A4 193 aaKnown RBP6.57□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF462Q96JM2 2506 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 MN1Q10571 1320 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 COL27A1Q8IZC6 1860 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CCDC66A2RUB6 948 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 GRID2IPA4D2P6 1211 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 C5orf60A6NFR6 353 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 PRR19A6NJB7 356 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TTLL8A6PVC2 850 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms