RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 MCM3P25205 808 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 SSTR1P30872 391 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 SLC1A2P43004 574 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.25
PTCH1-213ENST00000546820 EIF3BP55884 814 aaKnown RBP13.52□□□□□ -0.25
PTCH1-213ENST00000546820 RPA4Q13156 261 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 KIR2DS5Q14953 304 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 PROX2Q3B8N5 592 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 TEDDM1Q5T9Z0 273 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 AGAP9Q5VTM2 703 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 IYDQ6PHW0 289 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 ABRAXAS1Q6UWZ7 409 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 CAPN12Q6ZSI9 719 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 GALNT7Q86SF2 657 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 GLRX5Q86SX6 157 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 SLC9B2Q86UD5 537 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 DENND6AQ8IWF6 608 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 UNC5BQ8IZJ1 945 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 PNPLA1Q8N8W4 532 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 GPR156Q8NFN8 814 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 MAPK15Q8TD08 544 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 ELMO1Q92556 727 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 LPGAT1Q92604 370 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 NAT6Q93015 286 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 P2RY12Q9H244 342 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 LRRC4CQ9HCJ2 640 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 PRDM8Q9NQV8 689 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 DLL3Q9NYJ7 618 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 TXNDC16Q9P2K2 825 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 ST14Q9Y5Y6 855 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 PRSS21Q9Y6M0 314 aa13.52□□□□□ -0.25
PTCH1-213ENST00000546820 LAMA1P25391 3075 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 E5RI56 91 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 HAUS5O94927 633 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 APOA4P06727 396 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 PKMP14618 531 aaKnown RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 CHRM3P20309 590 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 ACP1P24666 158 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 RPL10P27635 214 aaKnown RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 STX2P32856 288 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 ID4P47928 161 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 ILKQ13418 452 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 TMED2Q15363 201 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 KYNUQ16719 465 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 C14orf28Q4W4Y0 310 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 TRMT10BQ6PF06 316 aaKnown RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 SLC26A11Q86WA9 606 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 SLC35F3Q8IY50 421 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 NAT14Q8WUY8 206 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 ASZ1Q8WWH4 475 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 SH3KBP1Q96B97 665 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 BIRC8Q96P09 236 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 PLAC1Q9HBJ0 212 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 FBXO6Q9NRD1 293 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 FAM8A1Q9UBU6 413 aa13.51□□□□□ -0.25
PTCH1-213ENST00000546820 APOBEC2Q9Y235 224 aaKnown RBP13.51□□□□□ -0.25
PTCH1-213ENST00000546820 TRBV23OR9-2A0A075B6M9 112 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 TCRBV9S1A1TA0A576 114 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 DCDC2BA2VCK2 349 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 CPED1A4D0V7 1026 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 EME2A4GXA9 379 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-213ENST00000546820 RHPN2P1A8MT19 583 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 IFRD1O00458 451 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-213ENST00000546820 NUDT21O43809 227 aaKnown RBP13.5□□□□□ -0.25
PTCH1-213ENST00000546820 NOBOXO60393 691 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 KCNK5O95279 499 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 AHSGP02765 367 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 SLC35G4P0C7Q5 338 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 PNLIPP16233 465 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 GLB1P16278 677 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 TNFRSF8P28908 595 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 GPX6P59796 221 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-213ENST00000546820 SEPT7Q16181 437 aaKnown RBP13.5□□□□□ -0.25
PTCH1-213ENST00000546820 UGT3A1Q6NUS8 523 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 OTOAQ7RTW8 1153 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 TRIM48Q8IWZ4 208 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 NAGSQ8N159 534 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 CXorf40BQ96DE9 158 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 COG4Q9H9E3 785 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 LRIT1Q9P2V4 623 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 CORO1CQ9ULV4 474 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-213ENST00000546820 HEBP2Q9Y5Z4 205 aa13.5□□□□□ -0.25
PTCH1-213ENST00000546820 ARID1BQ8NFD5 2236 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 PRR19A6NJB7 356 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 VIPP01282 170 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 GP1BAP07359 652 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 TUBBP07437 444 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 ITGB6P18564 788 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms