RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	TUBGCP3	Q96CW5	907 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.05	□□□□□ -0.8
UBC-213	ENST00000546120	RNF170	Q96K19	258 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	TNIP3	Q96KP6	325 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	COL21A1	Q96P44	957 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	FCRL5	Q96RD9	977 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	SIGLEC11	Q96RL6	698 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	LGMN	Q99538	433 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	IL12RB2	Q99665	862 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	PITX2	Q99697	317 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	TRIM62	Q9BVG3	475 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	AMBRA1	Q9C0C7	1298 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	OSBPL2	Q9H1P3	480 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	C12orf4	Q9NQ89	552 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	CHRAC1	Q9NRG0	131 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.05	□□□□□ -0.8
UBC-213	ENST00000546120	NDRG4	Q9ULP0	352 aa	Known RBP	10.05	□□□□□ -0.8
UBC-213	ENST00000546120	USP22	Q9UPT9	525 aa		10.05	□□□□□ -0.8
UBC-213	ENST00000546120	MEIOC	A2RUB1	952 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	KRT87P	A6NCN2	255 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120		H0YC42	278 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120		H0YIN7	160 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TFEC	O14948	347 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	DCLK1	O15075	740 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	MPZL2	O60487	215 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	XYLB	O75191	536 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZNF780A	O75290	641 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	CRCP	O75575	148 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	GDF11	O95390	407 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	CAPN1	P07384	714 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	RPS17	P08708	135 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ALDOC	P09972	364 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	MYCL	P12524	364 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HGF	P14210	728 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	IL7R	P16871	459 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	IGFBP5	P24593	272 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	CCNC	P24863	283 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HRH2	P25021	359 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	AKT1	P31749	480 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	GGT5	P36269	586 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	DCT	P40126	519 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	GLRB	P48167	497 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	GZMK	P49863	264 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SERPINH1	P50454	418 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ETV1	P50549	477 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TAS2R39	P59534	338 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	S100A12	P80511	92 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	CSTF3	Q12996	717 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	CA9	Q16790	459 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	CTU2	Q2VPK5	515 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZIK1	Q3SY52	487 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TBRG1	Q3YBR2	411 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	MTERF2	Q49AM1	385 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HSD17B12	Q53GQ0	312 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	DALRD3	Q5D0E6	543 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HABP4	Q5JVS0	413 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	KIAA1614	Q5VZ46	1190 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TRNP1	Q6NT89	227 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	MZT2B	Q6NZ67	158 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TBPL2	Q6SJ96	375 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SH3BP5L	Q7L8J4	393 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZNF367	Q7RTV3	350 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SLC46A3	Q7Z3Q1	461 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	KCTD20	Q7Z5Y7	419 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZFAND4	Q86XD8	727 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	LURAP1L	Q8IV03	231 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	RDH10	Q8IZV5	341 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	DEPDC4	Q8N2C3	294 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	NATD1	Q8N6N6	113 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ANKRD53	Q8N9V6	530 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	OR2T12	Q8NG77	320 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	KLHL6	Q8WZ60	621 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SLC47A1	Q96FL8	570 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	PGAP3	Q96FM1	320 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HPDL	Q96IR7	371 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZFYVE19	Q96K21	471 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZBTB45	Q96K62	511 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	FRMD6	Q96NE9	622 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ZNF599	Q96NL3	588 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	GAD1	Q99259	594 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SEPHS2	Q99611	448 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TTLL2	Q9BWV7	592 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	FZD8	Q9H461	694 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ACTR8	Q9H981	624 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	ARNT2	Q9HBZ2	717 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	TRIM39	Q9HCM9	518 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	PAK6	Q9NQU5	681 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	HEBP1	Q9NRV9	189 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	FBXL12	Q9NXK8	326 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	RIMKLB	Q9ULI2	386 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SAMD4A	Q9UPU9	718 aa	Known RBP	10.04	□□□□□ -0.8
UBC-213	ENST00000546120	GMPPB	Q9Y5P6	360 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	DNAJC15	Q9Y5T4	150 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	SI	P14410	1827 aa		10.04	□□□□□ -0.8
UBC-213	ENST00000546120	LRRC37A	A6NMS7	1700 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms