RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TPK1Q9H3S4 243 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 MROH8Q9H579 483 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 CATSPERZQ9NTU4 200 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 UXTQ9UBK9 157 aaPredicted RBP14.02□□□□□ -0.16
SRP54-202ENST00000546080 ZNF225Q9UK10 706 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 PCTPQ9UKL6 214 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 CDH9Q9ULB4 789 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 PMF1-BGLAPU3KQ54 211 aa14.02□□□□□ -0.16
SRP54-202ENST00000546080 UBA6A0AVT1 1052 aaPredicted RBP14.02□□□□□ -0.17
SRP54-202ENST00000546080 RRN3P2A6NIE6 340 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 NFKBIEO00221 500 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 NDST3O95803 873 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 PEX11BO96011 259 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 MMP2P08253 660 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 AGTR2P50052 363 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 RAD51Q06609 339 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 PPP1R8Q12972 351 aaKnown RBP14.02□□□□□ -0.17
SRP54-202ENST00000546080 IL18R1Q13478 541 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 SF3B4Q15427 424 aaKnown RBP eCLIP14.02□□□□□ -0.172e-8■■□□□ 14.5
SRP54-202ENST00000546080 PAQR3Q6TCH7 311 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 GPRIN3Q6ZVF9 776 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 NANOGNBQ7Z5D8 188 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 ADHFE1Q8IWW8 467 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 OR8J3Q8NGG0 315 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 OR56A4Q8NGH8 313 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 GPR150Q8NGU9 434 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 OR5K1Q8NHB7 308 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 PSMA8Q8TAA3 256 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 BLOC1S5Q8TDH9 187 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 PPP1R13LQ8WUF5 828 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 FAM162AQ96A26 154 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 MYLPFQ96A32 169 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 YIPF6Q96EC8 236 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 ZNF583Q96ND8 569 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 ALOXE3Q9BYJ1 711 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 SP140LQ9H930 580 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 CPNE5Q9HCH3 593 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.02□□□□□ -0.17
SRP54-202ENST00000546080 UTS2RQ9UKP6 389 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 IKZF3Q9UKT9 509 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 FAM50BQ9Y247 325 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 TMEM98Q9Y2Y6 226 aa14.02□□□□□ -0.17
SRP54-202ENST00000546080 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.01□□□□□ -0.17
SRP54-202ENST00000546080 NPEPPSL1A6NEC2 478 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 TTC34A8MYJ7 566 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 FAM47E-STBD1D6RA91 191 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ARNTLO00327 626 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ENPP3O14638 875 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 STX16O14662 325 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 PTGESO14684 152 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 PRKACGP22612 351 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 PSMB9P28065 219 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 MAP2K4P45985 399 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 PPP5CP53041 499 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 NCS1P62166 190 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 SLC10A7Q0GE19 358 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 CDC20Q12834 499 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 EIF4EBP2Q13542 120 aaPredicted RBP14.01□□□□□ -0.17
SRP54-202ENST00000546080 PTPRCAPQ14761 206 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ATAD3BQ5T9A4 648 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 TXNDC11Q6PKC3 985 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 CDYL2Q8N8U2 506 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 FRS2Q8WU20 508 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ZFP42Q96MM3 310 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ZNF300Q96RE9 604 aaPredicted RBP14.01□□□□□ -0.17
SRP54-202ENST00000546080 TRIT1Q9H3H1 467 aaKnown RBP14.01□□□□□ -0.17
SRP54-202ENST00000546080 AGO3Q9H9G7 860 aaKnown RBP14.01□□□□□ -0.17
SRP54-202ENST00000546080 SP110Q9HB58 689 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 CSNK1G1Q9HCP0 422 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ERVK-18Q9QC07 812 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 IFT52Q9Y366 437 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 ARL5AQ9Y689 179 aa14.01□□□□□ -0.17
SRP54-202ENST00000546080 A8MU76 341 aa14□□□□□ -0.17
SRP54-202ENST00000546080 J3KR12 359 aa14□□□□□ -0.17
SRP54-202ENST00000546080 CDC7O00311 574 aa14□□□□□ -0.17
SRP54-202ENST00000546080 IFRD1O00458 451 aaPredicted RBP14□□□□□ -0.17
SRP54-202ENST00000546080 LSM1O15116 133 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 RPP40O75818 363 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 OR4F21O95013 312 aa14□□□□□ -0.17
SRP54-202ENST00000546080 CYP11A1P05108 521 aa14□□□□□ -0.17
SRP54-202ENST00000546080 MMP3P08254 477 aa14□□□□□ -0.17
SRP54-202ENST00000546080 OGNP20774 298 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 FSHRP23945 695 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ALDH7A1P49419 539 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 DGKQP52824 942 aa14□□□□□ -0.17
SRP54-202ENST00000546080 ACVR1Q04771 509 aa14□□□□□ -0.17
SRP54-202ENST00000546080 DGCR6Q14129 220 aa14□□□□□ -0.17
SRP54-202ENST00000546080 RFX4Q33E94 735 aa14□□□□□ -0.17
SRP54-202ENST00000546080 PAGE2Q7Z2X7 111 aa14□□□□□ -0.17
SRP54-202ENST00000546080 C14orf80Q86SX3 495 aa14□□□□□ -0.17
SRP54-202ENST00000546080 PLD3Q8IV08 490 aa14□□□□□ -0.17
SRP54-202ENST00000546080 OR4L1Q8NH43 312 aa14□□□□□ -0.17
SRP54-202ENST00000546080 TMEM40Q8WWA1 233 aa14□□□□□ -0.17
SRP54-202ENST00000546080 HTRA1Q92743 480 aa14□□□□□ -0.17
SRP54-202ENST00000546080 REXO5Q96IC2 774 aaKnown RBP14□□□□□ -0.17
SRP54-202ENST00000546080 BTBD2Q9BX70 525 aa14□□□□□ -0.17
SRP54-202ENST00000546080 DSN1Q9H410 356 aa14□□□□□ -0.17
SRP54-202ENST00000546080 HEBP1Q9NRV9 189 aa14□□□□□ -0.17
SRP54-202ENST00000546080 TAS2R13Q9NYV9 303 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms