RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 NXPH1P58417 271 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 IL2P60568 153 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 SRP54P61011 504 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 ARHGAP8P85298 464 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 PPARDQ03181 441 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 AGAP9Q5VTM2 703 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 KLC3Q6P597 504 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 ENPP7Q6UWV6 458 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 SH2D5Q6ZV89 423 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 C11orf96Q7Z7L8 435 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CLEC14AQ86T13 490 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 TRIM74Q86UV6 250 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 ZNF547Q8IVP9 402 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CYP4X1Q8N118 509 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC22A18ASQ8N1D0 253 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 TMEM159Q96B96 161 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 APOPT1Q96IL0 206 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 MYOCQ99972 504 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 ZDHHC5Q9C0B5 715 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 DERL2Q9GZP9 239 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 NMRAL1Q9HBL8 299 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 FGF22Q9HCT0 170 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 TM9SF1O15321 606 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SLCO2B1O94956 709 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 KLHL2O95198 593 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 TRIM16O95361 564 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SYF2O95926 243 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 TNFP01375 233 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 MPC1LP0DKB6 136 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 NME1P15531 152 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 KRT4P19013 534 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 HK3P52790 923 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SP140Q13342 867 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 ZNF658BQ4V348 819 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SYTL3Q4VX76 610 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 DOK6Q6PKX4 331 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 WASH2PQ6VEQ5 465 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 MTERF4Q7Z6M4 381 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SRRM1Q8IYB3 904 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 FSTL5Q8N475 847 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 ARFGAP2Q8N6H7 521 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 ELMO1Q92556 727 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 IQCGQ9H095 443 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 MIR1-1HGQ9H1L0 117 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 WASH6PQ9NQA3 447 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 RAB23Q9ULC3 237 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 GRID1Q9ULK0 1009 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SUFUQ9UMX1 484 aa15.74■□□□□ 0.11
PRPF40A-212ENST00000545856 SDK1Q7Z5N4 2213 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC5A10A0PJK1 596 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 PRR19A6NJB7 356 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 COPEO14579 308 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 POP7O75817 140 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 EPN2O95208 641 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 LTA4HP09960 611 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC2A4P14672 509 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 CCR7P32248 378 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 ABCG1P45844 678 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 HNRNPKP61978 463 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 TIAL1Q01085 375 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 ILF3Q12906 894 aaKnown RBP eCLIP15.73■□□□□ 0.116e-10■■■■■ 32.4
PRPF40A-212ENST00000545856 FZD2Q14332 565 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 DUOXA1Q1HG43 343 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 ALG11Q2TAA5 492 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 CCDC153Q494R4 210 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 IL27RAQ6UWB1 636 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 DET1Q7L5Y6 550 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 CMC1Q7Z7K0 106 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 ADAMTSL2Q86TH1 951 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 EXOC3L1Q86VI1 746 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 CEP97Q8IW35 865 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC22A15Q8IZD6 547 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 MYO1HQ8N1T3 1032 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 BANPQ8N9N5 519 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 AVL9Q8NBF6 648 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 RHEBL1Q8TAI7 183 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 GSDMCQ9BYG8 508 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC13A1Q9BZW2 595 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 COG4Q9H9E3 785 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 CARS2Q9HA77 564 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 NOVA2Q9UNW9 492 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 TMEM98Q9Y2Y6 226 aa15.73■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC16A5O15375 505 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 ZWINTO95229 277 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 CSF2P04141 144 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 RPN2P04844 631 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 ENO2P09104 434 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 RBP1P09455 135 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 PYGBP11216 843 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 ITPKAP23677 461 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 ACAP2Q15057 778 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 METRNLQ641Q3 311 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 PAQR3Q6TCH7 311 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 PHC3Q8NDX5 983 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 GIMAP7Q8NHV1 300 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 OR1E3Q8WZA6 343 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 CCDC97Q96F63 343 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 PDXPQ96GD0 296 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms