RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZNF449Q6P9G9 518 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC137Q6PK04 289 aaKnown RBP15.41■□□□□ 0.06
CCDC78-216ENST00000544996 C19orf48Q6RUI8 117 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 AFTPHQ6ULP2 937 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CERS6Q6ZMG9 384 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CLEC14AQ86T13 490 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 PIANPQ8IYJ0 282 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 OR13J1Q8NGT2 312 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 OR6P1Q8NGX9 317 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 HM13Q8TCT9 377 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 NAT14Q8WUY8 206 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 KCNE4Q8WWG9 221 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 CCM2Q9BSQ5 444 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 PDP2Q9P2J9 529 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 ANAPC5Q9UJX4 755 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 PCDHGA7Q9Y5G6 932 aa15.41■□□□□ 0.06
CCDC78-216ENST00000544996 COL27A1Q8IZC6 1860 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-216ENST00000544996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-216ENST00000544996 OR51F1A6NGY5 319 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 USP27XA6NNY8 438 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 F8W8V4 182 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 SGTAO43765 313 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 POLBP06746 335 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 GSTM1P09488 218 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 PRSS56P0CW18 603 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 ITIH1P19827 911 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 SLC5A2P31639 672 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 VPS41P49754 854 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 MAPK10P53779 464 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 GNG11P61952 73 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 GSTM4Q03013 218 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 ACVR1Q04771 509 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 GPR18Q14330 331 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 ITIH4Q14624 930 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 GSE1Q14687 1217 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 DBN1Q16643 649 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 FASTKD1Q53R41 847 aaKnown RBP15.4■□□□□ 0.06
CCDC78-216ENST00000544996 SNAP47Q5SQN1 464 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 KLHL35Q6PF15 583 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 CLDN19Q8N6F1 224 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 OR4L1Q8NH43 312 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 GRK7Q8WTQ7 553 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 NAF1Q96HR8 494 aaKnown RBP15.4■□□□□ 0.06
CCDC78-216ENST00000544996 DPH1Q9BZG8 443 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 WWP1Q9H0M0 922 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 CHRAC1Q9NRG0 131 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 IMP3Q9NV31 184 aaKnown RBP15.4■□□□□ 0.06
CCDC78-216ENST00000544996 TMEM9Q9P0T7 183 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 SLC2A6Q9UGQ3 507 aa15.4■□□□□ 0.06
CCDC78-216ENST00000544996 KMT2BQ9UMN6 2715 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-216ENST00000544996 DMXL2Q8TDJ6 3036 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 NVLO15381 856 aaKnown RBP15.39■□□□□ 0.05
CCDC78-216ENST00000544996 PHF2O75151 1096 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 GOT2P00505 430 aaKnown RBP15.39■□□□□ 0.05
CCDC78-216ENST00000544996 MTHFD1P11586 935 aaKnown RBP15.39■□□□□ 0.05
CCDC78-216ENST00000544996 TYRP1P17643 537 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 FOXN2P32314 431 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 KRT33BQ14525 404 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 AARS2Q5JTZ9 985 aaKnown RBP15.39■□□□□ 0.05
CCDC78-216ENST00000544996 BROXQ5VW32 411 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 LRRC8BQ6P9F7 803 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 PACS1Q6VY07 963 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 SPACA3Q8IXA5 215 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 ZFPM2Q8WW38 1151 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 SGSM3Q96HU1 749 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 C12orf66Q96MD2 445 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 ZNF778Q96MU6 729 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 B3GNT4Q9C0J1 378 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.39■□□□□ 0.05
CCDC78-216ENST00000544996 KLHL3Q9UH77 587 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 COLEC10Q9Y6Z7 277 aa15.39■□□□□ 0.05
CCDC78-216ENST00000544996 APC2O95996 2303 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 CACNA1BQ00975 2339 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 ZNF106Q9H2Y7 1883 aaKnown RBP15.38■□□□□ 0.05
CCDC78-216ENST00000544996 PRAMEF33A0A0G2JMD5 474 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 A8MU76 341 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 IFRD1O00458 451 aaPredicted RBP15.38■□□□□ 0.05
CCDC78-216ENST00000544996 ZNF185O15231 689 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 KLK10O43240 276 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 FTH1P02794 183 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 OR56A5P0C7T3 313 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 ITPKBP27987 946 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 CAPZBP47756 277 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 FNTAP49354 379 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 TERF1P54274 439 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 CRADDP78560 199 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 RPA4Q13156 261 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 PLCL1Q15111 1095 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 COL28A1Q2UY09 1125 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 FAM129CQ86XR2 697 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 USP7Q93009 1102 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 ZDHHC12Q96GR4 267 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 TAAR9Q96RI9 348 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 INSM2Q96T92 566 aaPredicted RBP15.38■□□□□ 0.05
CCDC78-216ENST00000544996 COG4Q9H9E3 785 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 LHX6Q9UPM6 363 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 HEBP2Q9Y5Z4 205 aa15.38■□□□□ 0.05
CCDC78-216ENST00000544996 CFAP20Q9Y6A4 193 aaKnown RBP15.38■□□□□ 0.05
CCDC78-216ENST00000544996 B4E171 279 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms