RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 IL9RQ01113 521 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 CCNIQ14094 377 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 PSMD6Q15008 389 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ELAVL1Q15717 326 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 SGSM1Q2NKQ1 1148 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 P3H1Q32P28 736 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 HS1BP3Q53T59 392 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 KCNT1Q5JUK3 1230 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 CERCAMQ5T4B2 595 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ARHGAP40Q5TG30 622 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 SFRP4Q6FHJ7 346 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 FOXR2Q6PJQ5 311 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC73Q6ZRK6 1079 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ACOT1Q86TX2 421 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ERICH1Q86X53 443 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 DHX40Q8IX18 779 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 FUKQ8N0W3 1084 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ARHGAP18Q8N392 663 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF557Q8N988 423 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 XXYLT1Q8NBI6 393 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ZMIZ2Q8NF64 920 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 ADAMTS18Q8TE60 1221 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 WFIKKN2Q8TEU8 576 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 TMA16Q96EY4 203 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 LRRC37BQ96QE4 947 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 LMF1Q96S06 567 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 TREX2Q9BQ50 279 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 PRSS16Q9NQE7 514 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 GDF3Q9NR23 364 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 OSER1Q9NX31 292 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 CGNQ9P2M7 1197 aaKnown RBP6.2□□□□□ -1.42
CPSF7-222ENST00000544585 DNAJC16Q9Y2G8 782 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 TTLL3Q9Y4R7 772 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 LOC400499M0QZD8 3231 aa6.2□□□□□ -1.42
CPSF7-222ENST00000544585 PGPEP1LA6NFU8 196 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 E7ENX8 843 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 TLR4O00206 839 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 EIF3DO15371 548 aaKnown RBP eCLIP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 SLC28A2O43868 658 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ERN1O75460 977 aaKnown RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 DLDP09622 509 aaKnown RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 PRKCHP24723 683 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 RBL1P28749 1068 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 PPIFP30405 207 aaKnown RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 GALCP54803 685 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ASIC1P78348 528 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 TAP2Q03519 686 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 CYP24A1Q07973 514 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 OVGP1Q12889 678 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF385BQ569K4 471 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF569Q5MCW4 686 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 TMEM215Q68D42 235 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF776Q68DI1 518 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 RGS7BPQ6MZT1 257 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ARHGEF18Q6ZSZ5 1173 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 CHST9Q7L1S5 443 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 RHOT2Q8IXI1 618 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 FSTL5Q8N475 847 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ANKRD52Q8NB46 1076 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 SLC2A14Q8TDB8 520 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 ADAMTS15Q8TE58 950 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 GANCQ8TET4 914 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 TMEM171Q8WVE6 324 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 TAF4BQ92750 862 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC127Q96BQ5 260 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 UBXN6Q9BZV1 441 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 XYLT2Q9H1B5 865 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 NMUR1Q9HB89 426 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 KRT84Q9NSB2 600 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 LIN7CQ9NUP9 197 aaKnown RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 FBXL12Q9NXK8 326 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 IL17BQ9UHF5 180 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 VPS51Q9UID3 782 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 BAG5Q9UL15 447 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 AGO1Q9UL18 857 aaKnown RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 SRPRBQ9Y5M8 271 aaKnown RBP6.19□□□□□ -1.42
CPSF7-222ENST00000544585 SLCO1B1Q9Y6L6 691 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 LAMA5O15230 3695 aa6.19□□□□□ -1.42
CPSF7-222ENST00000544585 DOPEY1Q5JWR5 2465 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 A0A1W2PR77 199 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 TARSL2A2RTX5 802 aaKnown RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 TCAF2A6NFQ2 919 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 FAM47DPA6NHR8 397 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 HHLA1C9JL84 531 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 STX16-NPEPL1H3BU86 382 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 STX16O14662 325 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 MDM4O15151 490 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CLIC2O15247 247 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 DHHO43323 396 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 TMCC2O75069 709 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 WNT1P04628 370 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 IGHV4-34P06331 123 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 POLR2EP19388 210 aaKnown RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 GJB2P29033 226 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 EPHA8P29322 1005 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CORO1AP31146 461 aaKnown RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 UQCRC1P31930 480 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 NUDT1P36639 197 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms