RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TTMPQ5BVD1 217 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 AGAP9Q5VTM2 703 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 KCTD16Q68DU8 428 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 SLC23A3Q6PIS1 610 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 LPCAT2Q7L5N7 544 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 EXOC3L1Q86VI1 746 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
YBX3-215ENST00000544504 SYT12Q8IV01 421 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 SLC41A1Q8IVJ1 513 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 KRT222Q8N1A0 295 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 NKAPQ8N5F7 415 aaKnown RBP9.38□□□□□ -0.91
YBX3-215ENST00000544504 FAM76AQ8TAV0 307 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 CENPTQ96BT3 561 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 COX14Q96I36 57 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 APOPT1Q96IL0 206 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 BIRC8Q96P09 236 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 GPR174Q9BXC1 333 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 TPSD1Q9BZJ3 242 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 GPAMQ9HCL2 828 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 SPATS2LQ9NUQ6 558 aaKnown RBP9.38□□□□□ -0.91
YBX3-215ENST00000544504 NKIRAS1Q9NYS0 192 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 MID2Q9UJV3 735 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 GRID1Q9ULK0 1009 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 GPR34Q9UPC5 381 aa9.38□□□□□ -0.91
YBX3-215ENST00000544504 DNMT3AQ9Y6K1 912 aaPredicted RBP9.38□□□□□ -0.91
YBX3-215ENST00000544504 OAS3Q9Y6K5 1087 aaKnown RBP9.38□□□□□ -0.91
YBX3-215ENST00000544504 A0A1W2PPM1 405 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 HMX2A2RU54 273 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 A6NNZ2 444 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 INPP4BO15327 924 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 OR1I1O60431 355 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 KCNJ13O60928 360 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 CDK14O94921 469 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 ZWINTO95229 277 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 ASMTLO95671 621 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 SOD1P00441 154 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 C2P06681 752 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 PRSS56P0CW18 603 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 CBSLP0DN79 551 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 VCLP18206 1134 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 SAT1P21673 171 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 BCKDHBP21953 392 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 OAS2P29728 719 aaKnown RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 MAT2AP31153 395 aaKnown RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 CRHR1P34998 444 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 HOXD12P35452 270 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 CBSP35520 551 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 MAPK9P45984 424 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 RABIFP47224 123 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 KIAA1024LP59773 190 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 IL2P60568 153 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 ATP6V0D1P61421 351 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 PPP2CBP62714 309 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 PPP2CAP67775 309 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 CDK3Q00526 305 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 PLOD1Q02809 727 aaPredicted RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 OVGP1Q12889 678 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 PTK2BQ14289 1009 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 FGL2Q14314 439 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 INPP5AQ14642 412 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 TUBB8Q3ZCM7 444 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 BCL7AQ4VC05 210 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 ZNF789Q5FWF6 425 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 RBM20Q5T481 1227 aaKnown RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 ZNF549Q6P9A3 640 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 KYAT3Q6YP21 454 aaKnown RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 OTOAQ7RTW8 1153 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 HEATR4Q86WZ0 1026 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 ASZ1Q8WWH4 475 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 ADAMTS14Q8WXS8 1223 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 INPP5DQ92835 1189 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 SKA1Q96BD8 255 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 SERAC1Q96JX3 654 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 NDNQ99608 321 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 KLF6Q99612 283 aaPredicted RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 APOOQ9BUR5 198 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 VPS11Q9H270 941 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 C6orf106Q9H6K1 298 aaPredicted RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 NMRAL1Q9HBL8 299 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 KCNK9Q9NPC2 374 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 OGFRQ9NZT2 677 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 MBD1Q9UIS9 605 aaPredicted RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 TMPRSS11EQ9UL52 423 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 CNOT6Q9ULM6 557 aaKnown RBP9.37□□□□□ -0.91
YBX3-215ENST00000544504 RAXQ9Y2V3 346 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 DHRS7Q9Y394 339 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 LRRK1Q38SD2 2015 aa9.37□□□□□ -0.91
YBX3-215ENST00000544504 EML5Q05BV3 1969 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 C17orf113A0A1B0GUU1 675 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 A0A1W2PPC4 97 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 METTL12A8MUP2 240 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 MEI4A8MW99 385 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 K7ESM1 405 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 TK2O00142 265 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 TNFRSF10CO14798 259 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 GPR39O43194 453 aa9.36□□□□□ -0.91
YBX3-215ENST00000544504 IGHV4-34P06331 123 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms