RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 DENND2DQ9H6A0 471 aaPredicted RBP12.66□□□□□ -0.38
CHD4-211ENST00000544484 NIPSNAP2O75323 286 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 SYN1P17600 705 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 RYKP34925 604 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 PLA2G16P53816 162 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 ENPEPQ07075 957 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 ILF3Q12906 894 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■■■□ 21.5
CHD4-211ENST00000544484 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 CRYBG2Q8N1P7 616 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 CMASQ8NFW8 434 aaPredicted RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 CDK15Q96Q40 435 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 FADS2O95864 444 aaKnown RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 ACVRL1P37023 503 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 OGDHQ02218 1023 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 TMEM110Q86TL2 294 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 HID1Q8IV36 788 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 NAT8LQ8N9F0 302 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 EVA1BQ9NVM1 165 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 YIPF1Q9Y548 306 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 ARVCFO00192 962 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 SAGP10523 405 aaPredicted RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 TFPIP10646 304 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 NSG1P42857 185 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 NR1D2Q14995 579 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 KIAA0930Q6ICG6 404 aaPredicted RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 SULT1C3Q6IMI6 304 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 PRSS58Q8IYP2 241 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 ZMIZ2Q8NF64 920 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 FCRL5Q96RD9 977 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 GAS2L1Q99501 681 aaPredicted RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 GNEQ9Y223 722 aaKnown RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 DNM1LO00429 736 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 TMCC2O75069 709 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 FOXN2P32314 431 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 MZT2AQ6P582 158 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 OSTM1Q86WC4 334 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 POC5Q8NA72 575 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 TPK1Q9H3S4 243 aa12.65□□□□□ -0.38
CHD4-211ENST00000544484 EIF2B3Q9NR50 452 aaKnown RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 RPL26L1Q9UNX3 145 aaKnown RBP12.65□□□□□ -0.38
CHD4-211ENST00000544484 COL1A1P02452 1464 aaPredicted RBP12.65□□□□□ -0.39
CHD4-211ENST00000544484 CXorf49A8MYA2 514 aaPredicted RBP12.65□□□□□ -0.39
CHD4-211ENST00000544484 H3BNH8 94 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 SAP18O00422 153 aaKnown RBP12.65□□□□□ -0.39
CHD4-211ENST00000544484 NR2F6P10588 404 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 RCVRNP35243 200 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 CASP9P55211 416 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 SLC20A2Q08357 652 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 MSANTD2Q6P1R3 559 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 PAQR3Q6TCH7 311 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 GLIS1Q8NBF1 620 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 ZNF354BQ96LW1 612 aa12.65□□□□□ -0.39
CHD4-211ENST00000544484 A0A0G2JN53 185 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 GCNT6Q5T4J0 391 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 GALNT18Q6P9A2 607 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 CADM2Q8N3J6 435 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 SUSD3Q96L08 255 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 FBXL18Q96ME1 805 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 OR5F1O95221 314 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 MATN4O95460 622 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 SLC5A9Q2M3M2 681 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 CNTD1Q8N815 330 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 NTAN1Q96AB6 310 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 BCL2L14Q9BZR8 327 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 RSL24D1Q9UHA3 163 aaKnown RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 RAPGEFL1Q9UHV5 662 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 ROBO1Q9Y6N7 1651 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 TNFRSF21O75509 655 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 SIX3O95343 332 aaPredicted RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 ITGAXP20702 1163 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 IGFBP5P24593 272 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 FAM174BQ3ZCQ3 159 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 FAM81AQ8TBF8 368 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 CYB5D2Q8WUJ1 264 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 SATB2Q9UPW6 733 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 PMM2O15305 246 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 CMPK1P30085 196 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 IL12RB1P42701 662 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 ADGRF1Q5T601 910 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 TMEM198Q66K66 360 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 HDDC3Q8N4P3 179 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 CLEC4MQ9H2X3 399 aaPredicted RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 MFHAS1Q9Y4C4 1052 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 TCHHQ07283 1943 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 hCG_2039718K7EN88 272 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 LAMP2P13473 410 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 HOXD13P35453 343 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 ZNF155Q12901 538 aaPredicted RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms