RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 WDR37Q9Y2I8 494 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 PTPRBP23467 1997 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 C17orf113A0A1B0GUU1 675 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 KLHL33A6NCF5 533 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 QSOX1O00391 747 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 PRMT5O14744 637 aaPredicted RBP14.8□□□□□ -0.04
CD9-210ENST00000543916 S1PR4O95977 384 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 FTH1P02794 183 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 GLB1P16278 677 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 ITGB6P18564 788 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 EIF3BP55884 814 aaKnown RBP14.8□□□□□ -0.04
CD9-210ENST00000543916 CTSL3PQ5NE16 218 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 RNF187Q5TA31 235 aaPredicted RBP14.8□□□□□ -0.04
CD9-210ENST00000543916 ABRAXAS1Q6UWZ7 409 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 DHRS13Q6UX07 377 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 WASH2PQ6VEQ5 465 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 NAPRTQ6XQN6 538 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 CCDC25Q86WR0 208 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 CFAP206Q8IYR0 622 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 MAPK15Q8TD08 544 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 NAT6Q93015 286 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 BIRC8Q96P09 236 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 FAM167BQ9BTA0 163 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 PHACTR1Q9C0D0 580 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 COG4Q9H9E3 785 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 VPS37BQ9H9H4 285 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 WASH6PQ9NQA3 447 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 FBXO6Q9NRD1 293 aaPredicted RBP14.8□□□□□ -0.04
CD9-210ENST00000543916 INTS10Q9NVR2 710 aaKnown RBP14.8□□□□□ -0.04
CD9-210ENST00000543916 SLC17A6Q9P2U8 582 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 LRIT1Q9P2V4 623 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 PCDHGA1Q9Y5H4 931 aa14.8□□□□□ -0.04
CD9-210ENST00000543916 KIR2DS5A0A0G2JLQ3 304 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 A0A0G2JNG1 304 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 OR52A4PA6NMU1 304 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 KIR2DS3K7RE56 304 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 PPM1DO15297 605 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 NUDT21O43809 227 aaKnown RBP14.79□□□□□ -0.04
CD9-210ENST00000543916 GP1BAP07359 652 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 GSTM1P09488 218 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 RHOXF2BP0C7M4 288 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 SLC2A4P14672 509 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 RPS3P23396 243 aaKnown RBP eCLIP14.79□□□□□ -0.04
CD9-210ENST00000543916 ECHS1P30084 290 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 FASLGP48023 281 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 PREPP48147 710 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 CLDN6P56747 220 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 UBE2IP63279 158 aaKnown RBP14.79□□□□□ -0.04
CD9-210ENST00000543916 MPP1Q00013 466 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 GSTM4Q03013 218 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 ILKQ13418 452 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 FRG1Q14331 258 aaKnown RBP14.79□□□□□ -0.04
CD9-210ENST00000543916 KIR2DS5Q14953 304 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 CLCA4Q14CN2 919 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.79□□□□□ -0.04
CD9-210ENST00000543916 CAPN12Q6ZSI9 719 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 ZNF438Q7Z4V0 828 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 LRRC6Q86X45 466 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 LMNTD2Q8IXW0 634 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 KRT222Q8N1A0 295 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
CD9-210ENST00000543916 OR6C4Q8NGE1 309 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 CALML6Q8TD86 181 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 PYROXD1Q8WU10 500 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 IFT81Q8WYA0 676 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 ELMO1Q92556 727 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 CCDC3Q9BQI4 270 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 RHOXF2Q9BQY4 288 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 FOXP3Q9BZS1 431 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 WWP1Q9H0M0 922 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 ZNF624Q9P2J8 865 aaPredicted RBP14.79□□□□□ -0.04
CD9-210ENST00000543916 GNPTGQ9UJJ9 305 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 FBXO5Q9UKT4 447 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 CRYL1Q9Y2S2 319 aa14.79□□□□□ -0.04
CD9-210ENST00000543916 PRAMEF33A0A0G2JMD5 474 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 OR5K4A6NMS3 321 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 RHPN2P1A8MT19 583 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 PFDN6O15212 129 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 OPA1O60313 960 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 TRIM16O95361 564 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 TOP3BO95985 862 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 PDHA2P29803 388 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 SSTR1P30872 391 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 FMO4P31512 558 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 CCR7P32248 378 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 SLC19A1P41440 591 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 CARSP49589 748 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 ADARP55265 1226 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 HHEXQ03014 270 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 BOP1Q14137 746 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 BRD3Q15059 726 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 PTRHD1Q6GMV3 140 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 RAB44Q7Z6P3 723 aaPredicted RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 ZNF761Q86XN6 746 aaPredicted RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 CNTN4Q8IWV2 1026 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 C2CD4AQ8NCU7 369 aaPredicted RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 GSDMBQ8TAX9 411 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 ADAMTS14Q8WXS8 1223 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 C9orf72Q96LT7 481 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms