RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 VIPR1P32241 457 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 CBSP35520 551 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 HACD2Q6Y1H2 254 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 RBM23Q86U06 439 aaKnown RBP16.8■□□□□ 0.28
PTPRO-209ENST00000543886 FUNDC1Q8IVP5 155 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 DCBLD1Q8N8Z6 715 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 FRS2Q8WU20 508 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 MRGPRX3Q96LB0 322 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 CDK15Q96Q40 435 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 ZNF184Q99676 751 aaPredicted RBP16.8■□□□□ 0.28
PTPRO-209ENST00000543886 SPATA16Q9BXB7 569 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 SPAG4Q9NPE6 437 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 SDR39U1Q9NRG7 319 aaPredicted RBP16.8■□□□□ 0.28
PTPRO-209ENST00000543886 DUS2Q9NX74 493 aaKnown RBP16.8■□□□□ 0.28
PTPRO-209ENST00000543886 WWOXQ9NZC7 414 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 CD84Q9UIB8 345 aa16.8■□□□□ 0.28
PTPRO-209ENST00000543886 PTBP2Q9UKA9 531 aaKnown RBP16.8■□□□□ 0.28
PTPRO-209ENST00000543886 E7ENX8 843 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 LEFTY1O75610 366 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 MATN4O95460 622 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 OTCP00480 354 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 POU2F2P09086 479 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 PRR35P0CG20 571 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 MSX2P35548 267 aaPredicted RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 HSPA7P48741 367 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ERVPABLB-1P60509 514 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 DHCR24Q15392 516 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ARSIQ5FYB1 569 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 SULT1C3Q6IMI6 304 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 PDE12Q6L8Q7 609 aaKnown RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 LETMD1Q6P1Q0 360 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 DNAJC5GQ8N7S2 189 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 BHLHE22Q8NFJ8 381 aaPredicted RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ITFG1Q8TB96 612 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ROPN1LQ96C74 230 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ACOX2Q99424 681 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 VCX3BQ9H321 246 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 KLHL42Q9P2K6 505 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 CROTQ9UKG9 612 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ANGPTL3Q9Y5C1 460 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ANGPT2O15123 496 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 BCAS2O75934 225 aaPredicted RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ADH5P11766 374 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 TCN1P20061 433 aaPredicted RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 XPAP23025 273 aaPredicted RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 AKT1P31749 480 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 DGKGP49619 791 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 B4GALNT1Q00973 533 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 PHKG1Q16816 387 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 SCIMPQ6UWF3 145 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 METTL6Q8TCB7 284 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 SMG7Q92540 1137 aaKnown RBP16.79■□□□□ 0.28
PTPRO-209ENST00000543886 ELOVL2Q9NXB9 296 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 IL36AQ9UHA7 158 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 NDUFAF1Q9Y375 327 aa16.79■□□□□ 0.28
PTPRO-209ENST00000543886 IGLV3-16A0A075B6K0 115 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 UPK3BL1B0FP48 263 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 UPK3BL2E5RIL1 263 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 OR7A17O14581 309 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 ADH1CP00326 375 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 CYP17A1P05093 508 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 CAPN1P07384 714 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 PSMD8P48556 350 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 ZFP1Q6P2D0 407 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 IZUMO2Q6UXV1 221 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 GDPD5Q8WTR4 605 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 DCUN1D1Q96GG9 259 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 IPPKQ9H8X2 491 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 AIG1Q9NVV5 245 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 EPS15L1Q9UBC2 864 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 OPTCQ9UBM4 332 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 SUCOQ9UBS9 1254 aaKnown RBP16.78■□□□□ 0.28
PTPRO-209ENST00000543886 LRCH1Q9Y2L9 728 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 GPR45Q9Y5Y3 372 aa16.78■□□□□ 0.28
PTPRO-209ENST00000543886 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
PTPRO-209ENST00000543886 PIKFYVEQ9Y2I7 2098 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 H3BNX3 289 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 TAPBPO15533 448 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 ASLP04424 464 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 SRPRAP08240 638 aaKnown RBP16.77■□□□□ 0.28
PTPRO-209ENST00000543886 ERVK-8P63133 956 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 MS4A2Q01362 244 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 ATP6AP1LQ52LC2 224 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 DET1Q7L5Y6 550 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 KBTBD2Q8IY47 623 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 OR4F6Q8NGB9 312 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 WFIKKN2Q8TEU8 576 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 DLG3Q92796 817 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 ASB9Q96DX5 294 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 RDH14Q9HBH5 336 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 PCDH12Q9NPG4 1184 aa16.77■□□□□ 0.28
PTPRO-209ENST00000543886 TSPAN11A1L157 253 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 KATNA1O75449 491 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 SMNDC1O75940 238 aaKnown RBP eCLIP16.77■□□□□ 0.27
PTPRO-209ENST00000543886 HMOX2P30519 316 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 CCR7P32248 378 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 DIO3P55073 304 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 MRPS22P82650 360 aaKnown RBP16.77■□□□□ 0.27
PTPRO-209ENST00000543886 BLMHQ13867 455 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms