RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SBSNQ6UWP8 590 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 CUZD1Q86UP6 607 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 AFAP1L2Q8N4X5 818 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 CXorf40AQ8TE69 158 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 RILPQ96NA2 401 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 MMADHCQ9H3L0 296 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 BATF3Q9NR55 127 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SORCS3Q9UPU3 1222 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 OARD1Q9Y530 152 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 MBTPS2O43462 519 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SGTAO43765 313 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SYNCRIPO60506 623 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 RECQL5O94762 991 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 SUPT7LO94864 414 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 UNC5CO95185 931 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SOD1P00441 154 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 FTH1P02794 183 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 NTSR1P30989 418 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 CCR7P32248 378 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 TIE1P35590 1138 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 HK3P52790 923 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SEC13P55735 322 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 NCALDP61601 193 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 TBCCQ15814 346 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 TMEM196Q5HYL7 178 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SH2D4BQ5SQS7 431 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 PLEKHS1Q5SXH7 462 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 ZNF776Q68DI1 518 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 PHYKPLQ8IUZ5 450 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 AADATQ8N5Z0 425 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 OR2T3Q8NH03 318 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 NAT14Q8WUY8 206 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 RSRC1Q96IZ7 334 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 TUBB6Q9BUF5 446 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 FAM126AQ9BYI3 521 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 NMUR2Q9GZQ4 415 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 PIAS3Q9Y6X2 628 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 NEMP1O14524 444 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 RAD51BO15315 384 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 MID1O15344 667 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 TSPAN6O43657 245 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 LZTS3O60299 673 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 SNX2O60749 519 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 HNRNPCL1O60812 293 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 MPC1LP0DKB6 136 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 DRD1P21728 446 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 EEF1DP29692 281 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 WASP42768 502 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 COPAP53621 1224 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 RPS14P62263 151 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 FOXD4Q12950 439 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 TGFBIQ15582 683 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 KHDC1Q4VXA5 237 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 C2orf27AQ580R0 203 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 AGBL4Q5VU57 503 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 SDE2Q6IQ49 451 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 FRA10AC1Q70Z53 315 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 TRMT11Q7Z4G4 463 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 ARHGAP22Q7Z5H3 698 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 ARL10Q8N8L6 244 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 PDPRQ8NCN5 879 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 AGR3Q8TD06 166 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 FAM131CQ96AQ9 280 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 MSANTD3Q96H12 275 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 EPHX3Q9H6B9 360 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 UBE2ZQ9H832 354 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 COQ6Q9Y2Z9 468 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 TRPC5OSA6NMA1 111 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 UBFD1O14562 309 aaKnown RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 NUAK1O60285 661 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 DIAPH2O60879 1101 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 MMP20O60882 483 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 SIX3O95343 332 aaPredicted RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 EGFP01133 1207 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 S100BP04271 92 aaPredicted RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 C7P10643 843 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 PRLHRP49683 370 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 LCP2Q13094 533 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 STARD3Q14849 445 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 AGERQ15109 404 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 SLC9B1Q4ZJI4 515 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 VWA5B1Q5TIE3 1220 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 METTL21CQ5VZV1 264 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 ANKS6Q68DC2 871 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 NEK10Q6ZWH5 1172 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 DET1Q7L5Y6 550 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 SLC44A3Q8N4M1 653 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 MAPK15Q8TD08 544 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 CCDC28BQ9BUN5 200 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 ZCCHC2Q9C0B9 1178 aaKnown RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 KCNK12Q9HB15 430 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 RDH14Q9HBH5 336 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 CD274Q9NZQ7 290 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 MBD1Q9UIS9 605 aaPredicted RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 PCTPQ9UKL6 214 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 CNOT6Q9ULM6 557 aaKnown RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 CAPN14A8MX76 684 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 MAP3K13O43283 966 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms